RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 DNAJC27Q9NZQ0 273 aa15.85■□□□□ 0.13
CCDC28A-203ENST00000617445 MPC1Q9Y5U8 109 aa15.85■□□□□ 0.13
CCDC28A-203ENST00000617445 TRAV40A0A0B4J280 105 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 ANXA2P2A6NMY6 339 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 C22orf46C9J442 243 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 P2RY10O00398 339 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 DNAJC8O75937 253 aaPredicted RBP15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 KLHL12Q53G59 568 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 DEGS2Q6QHC5 323 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 ZNF826PQ6ZT77 177 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 C11orf53Q8IXP5 236 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 OR1M1Q8NGA1 313 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 C12orf43Q96C57 262 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 DMRTB1Q96MA1 342 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 PAPOLGQ9BWT3 736 aaKnown RBP15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 PRDM13Q9H4Q3 707 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 CTSZQ9UBR2 303 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 POMPQ9Y244 141 aa15.84■□□□□ 0.13
CCDC28A-203ENST00000617445 ACOD1A6NK06 481 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 ZNF879B4DU55 563 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 SELENOFO60613 162 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 GYPAP02724 150 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 PRKACGP22612 351 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 FAM90A1Q86YD7 464 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 HS3ST5Q8IZT8 346 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 SLC7A6OSQ96CW6 309 aaPredicted RBP15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 C1orf147Q96MC9 270 aaPredicted RBP15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 YIPF3Q9GZM5 350 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 TLNRD1Q9H1K6 362 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 BRD7Q9NPI1 651 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 ZNF319Q9P2F9 582 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 LAMP5Q9UJQ1 280 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 RHBDD3Q9Y3P4 386 aa15.83■□□□□ 0.12
CCDC28A-203ENST00000617445 IGHV3OR16-10A0A075B7F0 116 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 TMEM210A6NLX4 147 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 GPR37O15354 613 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 TOX4O94842 621 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 CST4P01036 141 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 ALOX5APP20292 161 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 SLC2A5P22732 501 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 PSMA6P60900 246 aaKnown RBP15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 RPS7P62081 194 aaKnown RBP15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 SLC9A3R2Q15599 337 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 GFOD2Q3B7J2 385 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 METTL11BQ5VVY1 283 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 KCTD18Q6PI47 426 aaPredicted RBP15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 WDR82Q6UXN9 313 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 LRRC29Q8WV35 223 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 ITPKCQ96DU7 683 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 ZNF747Q9BV97 191 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 RTL8AQ9BWD3 113 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 NOX4Q9NPH5 578 aa15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 PAPOLBQ9NRJ5 636 aaKnown RBP15.82■□□□□ 0.12
CCDC28A-203ENST00000617445 DVL1O14640 695 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 TMPRSS2O15393 492 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 CRISP1P54107 249 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 IL13RA1P78552 427 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 HOXA4Q00056 320 aaPredicted RBP15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 PDCD1Q15116 288 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 SNAPC1Q16533 368 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 FAM76BQ5HYJ3 339 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 SLC36A1Q7Z2H8 476 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 KRT77Q7Z794 578 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 WDR86Q86TI4 376 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 OR10Z1Q8NGY1 313 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 ZDHHC16Q969W1 377 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 WDFY2Q96P53 400 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 DUX5Q96PT3 197 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 PCGF1Q9BSM1 259 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 PRRG3Q9BZD7 231 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 DNTTIP1Q9H147 329 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 TMEM14AQ9Y6G1 99 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 MGAM2Q2M2H8 2515 aa15.81■□□□□ 0.12
CCDC28A-203ENST00000617445 POM121CA8CG34 1229 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 SRRM5B3KS81 715 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 DCTDP32321 178 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 RASSF2P50749 326 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 ESRRGP62508 458 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 APOFQ13790 326 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 ATPAF1Q5TC12 328 aaPredicted RBP15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 LCN1P1Q5VSP4 162 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 FAHD1Q6P587 224 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 C16orf87Q6PH81 154 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 SHISA2Q6UWI4 295 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 BTN2A1Q7KYR7 527 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 KRT74Q7RTS7 529 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 ASB17Q8WXJ9 295 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 FAM71F1Q96KD3 344 aaPredicted RBP15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 HIST1H2AAQ96QV6 131 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 TEAD3Q99594 435 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 MROQ9BYG7 248 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 SMURF1Q9HCE7 757 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 TVP23BQ9NYZ1 205 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 LRP12Q9Y561 859 aa15.8■□□□□ 0.12
CCDC28A-203ENST00000617445 A0A0U1RQV5 110 aa15.79■□□□□ 0.12
CCDC28A-203ENST00000617445 CDIPTO14735 213 aa15.79■□□□□ 0.12
CCDC28A-203ENST00000617445 GSC2O15499 205 aa15.79■□□□□ 0.12
CCDC28A-203ENST00000617445 ZNF254O75437 659 aa15.79■□□□□ 0.12
CCDC28A-203ENST00000617445 MMP9P14780 707 aa15.79■□□□□ 0.12
CCDC28A-203ENST00000617445 ATP6V1B1P15313 513 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms