RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SLC26A10Q8NG04 563 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 OR2AJ1Q8NGZ0 328 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNRF4Q8WWF5 429 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 UBE2FQ969M7 185 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 Q96MT0 163 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 WACQ9BTA9 647 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 CLN6Q9NWW5 311 aa13.68□□□□□ -0.22
SHKBP1-215ENST00000597649 SLC22A31A6NKX4 558 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 C22orf46C9J442 243 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 M0QZ24 198 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 MLNRO43193 412 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 SGCEO43556 437 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 CLIC3O95833 236 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 CRYBA1P05813 215 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 SFTPBP07988 381 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 MELTFP08582 738 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 DBHP09172 617 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 RAC2P15153 192 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 PITPNBP48739 271 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 SCRN3Q0VDG4 424 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 AADACL4Q5VUY2 407 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNF691Q5VV52 312 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 WDR25Q64LD2 544 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 ERI1Q8IV48 349 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 ENTHD1Q8IYW4 607 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 C8orf59Q8N0T1 100 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 TFAP2CQ92754 450 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNF582Q96NG8 517 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 INTS14Q96SY0 518 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 TEAD3Q99594 435 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 NOX4Q9NPH5 578 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 DNAJC27Q9NZQ0 273 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 KCNG2Q9UJ96 466 aa13.67□□□□□ -0.22
SHKBP1-215ENST00000597649 F5H5P2 479 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 IFNL4K9M1U5 179 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNF593O00488 134 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 FSTL3O95633 263 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 SPARCP09486 303 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 SLC2A5P22732 501 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 ENTPD1P49961 510 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 AQP6Q13520 282 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 LINC01590Q5TEZ4 76 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 OR8G5Q8NG78 346 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 OR6N2Q8NGY6 317 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 RHOXF1Q8NHV9 184 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 WDR76Q9H967 626 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 MRPL22Q9NWU5 206 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 PTTG3PQ9NZH4 202 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 ASH2LQ9UBL3 628 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 WARS2Q9UGM6 360 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 COMMD3-BMI1R4GMX3 469 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 HSPE1-MOB4S4R3N1 261 aa13.66□□□□□ -0.22
SHKBP1-215ENST00000597649 OR6C6A6NF89 314 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 TNFRSF13BO14836 293 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 TIMM23O14925 209 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 ENTPD6O75354 484 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 TSPAN15O95858 294 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 HTR1FP30939 366 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 TMED1Q13445 227 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 ZNF181Q2M3W8 571 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 SLC25A30Q5SVS4 291 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 GPR157Q5UAW9 335 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 LYPD4Q6UWN0 246 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 SHFQ7M4L6 423 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 LINC00346Q8IVM7 164 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 C19orf18Q8NEA5 215 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 OR13G1Q8NGZ3 307 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 CLN8Q9UBY8 286 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 AASSQ9UDR5 926 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 RNF114Q9Y508 228 aa13.65□□□□□ -0.22
SHKBP1-215ENST00000597649 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 CCDC182A6NF36 153 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 CLPXO76031 633 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 MRPL3P09001 348 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 MMP9P14780 707 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 NAA10P41227 235 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 SRP9P49458 86 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 PROK1P58294 105 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 BPIFB3P59826 476 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 POU4F2Q12837 409 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 TAF9Q16594 264 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 CORO6Q6QEF8 472 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 OR1F12Q8NHA8 337 aa13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 FAM71F1Q96KD3 344 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-215ENST00000597649 COG8Q96MW5 612 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms