RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 OR10S1Q8NGN2 331 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 OR52N1Q8NH53 320 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 SNX33Q8WV41 574 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 GGHQ92820 318 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 MYDGFQ969H8 173 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 APOBEC3DQ96AK3 386 aaPredicted RBP8.62□□□□□ -1.03
SDF2-209ENST00000591903 TMEM80Q96HE8 168 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 CNBD2Q96M20 576 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 SIGLEC11Q96RL6 698 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 ZNF649Q9BS31 505 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 COPS4Q9BT78 406 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 CDCA4Q9BXL8 241 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 RGCCQ9H4X1 137 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 CDH20Q9HBT6 801 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 CAB39Q9Y376 341 aaPredicted RBP8.62□□□□□ -1.03
SDF2-209ENST00000591903 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 PCDHGB5Q9Y5G0 923 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
SDF2-209ENST00000591903 LOC100509620A0A075B734 347 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 A0A1W2PQL4 384 aaPredicted RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 DAPL1A0PJW8 107 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 C5orf49A4QMS7 147 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 C17orf100A8MU93 164 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 M0R135 149 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CDC14BO60729 498 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 FAM20BO75063 409 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 ABHD16AO95870 558 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 KRT8P05787 483 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CRYBA1P05813 215 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CDK1P06493 297 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 H2BFMP0C1H6 154 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 ACSM4P0C7M7 580 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 PATE4P0C8F1 98 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 PSKH1P11801 424 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 MYL12AP19105 171 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CFL1P23528 166 aaKnown RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 HSD11B1P28845 292 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 MAGEB1P43366 347 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 LCN2P80188 198 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 SMN1Q16637 294 aaKnown RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 NKPD1Q17RQ9 610 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 HFEQ30201 348 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 KCTD21Q4G0X4 260 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 FAM209AQ5JX71 171 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 OLFML2AQ68BL7 652 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CORO6Q6QEF8 472 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 REC114Q7Z4M0 266 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 KRT77Q7Z794 578 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 CCDC54Q8NEL0 328 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 OR10H4Q8NGA5 316 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 AKR7LQ8NHP1 331 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 THEM6Q8WUY1 208 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 ZNF799Q96GE5 643 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 MS4A3Q96HJ5 214 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 C4orf45Q96LM5 186 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 ZNF48Q96MX3 618 aaPredicted RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 MRI1Q9BV20 369 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 MS4A7Q9GZW8 240 aaPredicted RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 ERVK13-1Q9NX77 482 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 CGGBP1Q9UFW8 167 aaPredicted RBP8.61□□□□□ -1.03
SDF2-209ENST00000591903 DUSP13Q9UII6 198 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 COPS3Q9UNS2 423 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 AUP1Q9Y679 476 aa8.61□□□□□ -1.03
SDF2-209ENST00000591903 A0A0U1RQV5 110 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 METTL15A6NJ78 407 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 XRCC2O43543 280 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 NGFP01138 241 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 MT-ND5P03915 603 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 MRPL3P09001 348 aaKnown RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 ATP6V1B1P15313 513 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 OMGP23515 440 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 TGM4P49221 684 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 UCP2P55851 309 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 CCL8P80075 99 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 BDH1Q02338 343 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 ZNF85Q03923 595 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 SLC3A1Q07837 685 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 SRSF4Q08170 494 aaKnown RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 ACSM1Q08AH1 577 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 ST3GAL4Q11206 333 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 TAF13Q15543 124 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 RSPO1Q2MKA7 263 aaPredicted RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 CCDC58Q4VC31 144 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 MBNL2Q5VZF2 373 aaKnown RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 TMPRSS11AQ6ZMR5 421 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 C9orf139Q6ZV77 190 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 PRSS45Q7RTY3 260 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 LRP11Q86VZ4 500 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 C1QL4Q86Z23 238 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
SDF2-209ENST00000591903 STX19Q8N4C7 294 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 KIR3DL3Q8N743 410 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 DEFB108BQ8NET1 73 aa8.6□□□□□ -1.03
SDF2-209ENST00000591903 BPIFB6Q8NFQ5 453 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms