RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SEMA6AQ9H2E6 1030 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 RASSF4Q9H2L5 321 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 SP140LQ9H930 580 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 ZNF556Q9HAH1 456 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 ARMC1Q9NVT9 282 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 ZNRD1Q9P1U0 126 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 VPREB3Q9UKI3 123 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 TVP23AA6NH52 213 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 H3BN98 237 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 ZNF593O00488 134 aaPredicted RBP14.25□□□□□ -0.13
RETREG3-210ENST00000590541 APOC1P02654 83 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 TGFBR2P37173 567 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 GRB2P62993 217 aaKnown RBP14.25□□□□□ -0.13
RETREG3-210ENST00000590541 FLOT2Q14254 428 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 TAF13Q15543 124 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 MPPED2Q15777 294 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 VAX1Q5SQQ9 334 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 SFRP4Q6FHJ7 346 aaPredicted RBP14.25□□□□□ -0.13
RETREG3-210ENST00000590541 SLC35E4Q6ICL7 350 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 OR6K6Q8NGW6 343 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 OR11L1Q8NGX0 322 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 SPRYD4Q8WW59 207 aaPredicted RBP14.25□□□□□ -0.13
RETREG3-210ENST00000590541 PPP1R14AQ96A00 147 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 SLCO4A1Q96BD0 722 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 KCNJ15Q99712 375 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 NIPSNAP1Q9BPW8 284 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 TOR3AQ9H497 397 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 WDR76Q9H967 626 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 UFSP2Q9NUQ7 469 aa14.25□□□□□ -0.13
RETREG3-210ENST00000590541 DNAH3Q8TD57 4116 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 GMDSO60547 372 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 HMGN1P05114 100 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 SPARCP09486 303 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 ANXA8P13928 327 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 CD200P41217 278 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 PRSS12P56730 875 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 DBPQ10586 325 aaPredicted RBP14.24□□□□□ -0.13
RETREG3-210ENST00000590541 OXLD1Q5BKU9 147 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 Q6ZTK2 550 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 SHFQ7M4L6 423 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 NAA40Q86UY6 237 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 GALNT4Q8N4A0 578 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 ZNF511Q8NB15 262 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 PLPP7Q8NBV4 271 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 OR51L1Q8NGJ5 315 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 ZNRF4Q8WWF5 429 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 SLAMF6Q96DU3 332 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 TEX12Q9BXU0 123 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 AURKAIP1Q9NWT8 199 aaPredicted RBP14.24□□□□□ -0.13
RETREG3-210ENST00000590541 FBLN5Q9UBX5 448 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 FAM96BQ9Y3D0 163 aa14.24□□□□□ -0.13
RETREG3-210ENST00000590541 CD300LBA8K4G0 201 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 LGALS8O00214 317 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 ADAM20O43506 726 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 XRCC2O43543 280 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 E2F6O75461 281 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 DNAJC8O75937 253 aaPredicted RBP14.23□□□□□ -0.13
RETREG3-210ENST00000590541 GYPBP06028 91 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 DDOSTP39656 456 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 RPS27P42677 84 aaKnown RBP14.23□□□□□ -0.13
RETREG3-210ENST00000590541 MZT1Q08AG7 82 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 BTN2A1Q7KYR7 527 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 SPATA24Q86W54 205 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 PAPD5Q8NDF8 572 aaKnown RBP14.23□□□□□ -0.13
RETREG3-210ENST00000590541 DNAJC9Q8WXX5 260 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 INTS14Q96SY0 518 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 CENPMQ9NSP4 180 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 MRPL15Q9P015 296 aaKnown RBP14.23□□□□□ -0.13
RETREG3-210ENST00000590541 RNF7Q9UBF6 113 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 DNAJB9Q9UBS3 223 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 SIGLEC9Q9Y336 463 aa14.23□□□□□ -0.13
RETREG3-210ENST00000590541 TCRBV3S1A0A5B6 114 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 BTBD17A6NE02 478 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 GLCEO94923 617 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 FBP1P09467 338 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 VSIG8P0DPA2 414 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 OSMP13725 252 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 GSTT1P30711 240 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 RASSF2P50749 326 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 OR8G1Q15617 311 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 KCNJ8Q15842 424 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 SNAI3Q3KNW1 292 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 LINC01590Q5TEZ4 76 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 C11orf44Q8N8P7 122 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 CFHR4Q92496 578 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 SLC7A6OSQ96CW6 309 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-210ENST00000590541 NRBF2Q96F24 287 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 NECAP2Q9NVZ3 263 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 FOXJ3Q9UPW0 622 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 POMPQ9Y244 141 aa14.22□□□□□ -0.13
RETREG3-210ENST00000590541 GGT3PA6NGU5 568 aa14.21□□□□□ -0.13
RETREG3-210ENST00000590541 PRR23D1E9PI22 279 aaPredicted RBP14.21□□□□□ -0.13
RETREG3-210ENST00000590541 PRODHO43272 600 aa14.21□□□□□ -0.13
RETREG3-210ENST00000590541 PRR23D2P0DMB1 279 aaPredicted RBP14.21□□□□□ -0.13
RETREG3-210ENST00000590541 CLUP10909 449 aa14.21□□□□□ -0.13
RETREG3-210ENST00000590541 CFL1P23528 166 aaKnown RBP14.21□□□□□ -0.13
RETREG3-210ENST00000590541 HSD11B1P28845 292 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms