RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LSM5Q9Y4Y9 91 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 TMEM131Q92545 1883 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 NSG1A0A0A6YYJ2 146 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF850A8MQ14 1090 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 NXPH3O95157 252 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 PGA4P0DJD7 388 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 PGA3P0DJD8 388 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 MGMTP16455 207 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 AKR1D1P51857 326 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 MC2RQ01718 297 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 CLVS2Q5SYC1 327 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 FAM180AQ6UWF9 173 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 OR2M3Q8NG83 312 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 OR5M8Q8NGP6 311 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A0A6YYD4 124 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 CDC14BO60729 498 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 FOSL2P15408 326 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 MEF2DQ14814 521 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 TRIM61Q5EBN2 209 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 URM1Q9BTM9 101 aaKnown RBP12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 LPAR5Q9H1C0 372 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 NUP50Q9UKX7 468 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 SPTA1P02549 2419 aa12.05□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A096LPE4 126 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 PMS2P1A4D2B8 440 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 TSPAN9O75954 239 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF735P0CB33 412 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 FAM166AQ6J272 317 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 GTPBP8Q8N3Z3 284 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 OR10A2Q9H208 303 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 CRLF2Q9HC73 371 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 WNT16Q9UBV4 365 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A0G2JMM0 328 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A1W2PPB8 328 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A1W2PRS3 328 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 KIR3DP1A8MWS1 328 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 SSX5O60225 188 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 PHLDA2Q53GA4 152 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 RPS19BP1Q86WX3 136 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 OR1S1Q8NH92 325 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 PARPBPQ9NWS1 579 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A1B0GTI1 187 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 M0R135 149 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 CXCL13O43927 109 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ITGA3P26006 1051 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ASCL1P50553 236 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 PCK2Q16822 640 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 WIPI1Q5MNZ9 446 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF774Q6NX45 483 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 FDX2Q6P4F2 183 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 OR1S2Q8NGQ3 325 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 KCNG3Q8TAE7 436 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 OXGR1Q96P68 337 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 FAAP24Q9BTP7 215 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
PRPF40B-209ENST00000548825 D6RAR5 112 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 AGTR1P30556 359 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 TMEM50BP56557 158 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 SNAI3Q3KNW1 292 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 OR2W3Q7Z3T1 314 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 C5orf24Q7Z6I8 188 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 DTX1Q86Y01 620 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 NUBPLQ8TB37 319 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 PIGCQ92535 297 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 FBXW5Q969U6 566 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 LRRC46Q96FV0 321 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 TSNAXQ99598 290 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 CDC6Q99741 560 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 RAB33BQ9H082 229 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 SCPEP1Q9HB40 452 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 IGKV1-9A0A0C4DH69 117 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 A6NJ64 397 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 H3BUI4 141 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 AQP8O94778 261 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 HIST1H1DP16402 221 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 RSU1Q15404 277 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 NXT1Q9UKK6 140 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 TOR1AO14656 332 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 TCN2P20062 427 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 NME2P22392 152 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 DUSP1P28562 367 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF169Q14929 603 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 OR5AS1Q8N127 324 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 OR5M9Q8NGP3 310 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 TERB2Q8NHR7 220 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 EDAQ92838 391 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
PRPF40B-209ENST00000548825 FAM96BQ9Y3D0 163 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms