RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 IFT22Q9H7X7 185 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 TRAF3IP2O43734 574 aaPredicted RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 PRAMEF4O60810 478 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 PF4P02776 101 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 GGTLC2Q14390 218 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 HFEQ30201 348 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SMIM21Q3B7S5 101 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM176BQ3YBM2 270 aaPredicted RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM97Q5BJF2 176 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 MRM1Q6IN84 353 aaKnown RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 GDPD3Q7L5L3 318 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 ANGPTL5Q86XS5 388 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 OSR2Q8N2R0 312 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 SIGLECL1Q8N7X8 197 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM105Q8N8V8 129 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 OR5D13Q8NGL4 314 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 APOBEC3DQ96AK3 386 aaPredicted RBP7.04□□□□□ -1.28
VPS13D-211ENST00000543710 GPA33Q99795 319 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM30CPA0ZSE6 113 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 HPP00738 406 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PNLIPP16233 465 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CD1CP29017 333 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 FCGR2CP31995 323 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PDLIM4P50479 330 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PPP2CBP62714 309 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PPP2CAP67775 309 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 KIAA0141Q14154 515 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 C2orf76Q3KRA6 126 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 FAM209AQ5JX71 171 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF787Q6DD87 383 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CHODLQ9H9P2 273 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 GCM1Q9NP62 436 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 KCMF1Q9P0J7 381 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 AQP7O14520 342 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 STAG3L2P0CL84 134 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CT45A10P0DMU9 189 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 NBL1P41271 181 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 GPR12P47775 334 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 TMEM30BQ3MIR4 351 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CYB5R2Q6BCY4 276 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ASCL5Q7RTU5 278 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SLC7A5P1Q8MH63 180 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 BPIFCQ8NFQ6 507 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 S1PR3Q99500 378 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF2Q9BSG1 426 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SF3B5Q9BWJ5 86 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 NAA50Q9GZZ1 169 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 MRPS18AQ9NVS2 196 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 FBXO34Q9NWN3 711 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 METRNQ9UJH8 293 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 A0A0B4J2E0 115 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 A0A1B0GX12 115 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 OR5H15A6NDH6 313 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SULT1A3P0DMM9 295 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SULT1A4P0DMN0 295 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SLC25A4P12235 298 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 OR10A3P58181 314 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 MRPS34P82930 218 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF425Q6IV72 752 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 TBPL2Q6SJ96 375 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ALKAL2Q6UX46 152 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF813Q6ZN06 617 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 OR13C9Q8NGT0 318 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ST8SIA2Q92186 375 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PSENENQ9NZ42 101 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 A0A087WUJ7 227 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CYTIPO60759 359 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PRSS23O95084 383 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 WISP1O95388 367 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 EPXP11678 715 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 FUT4P22083 530 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CD200P41217 278 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CNN1P51911 297 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 NDUFA6P56556 154 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 RPS16P62249 146 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 NNATQ16517 81 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PRR22Q8IZ63 422 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 OR52I2Q8NH67 350 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF707Q96C28 371 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 COA3Q9Y2R0 106 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CBR3O75828 277 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 ZNF17P17021 662 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 PSMB5P28074 263 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 GABRA2P47869 451 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 GZMKP49863 264 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 CCR6P51684 374 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SNU13P55769 128 aaKnown RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 FOXO1Q12778 655 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 C8orf82Q6P1X6 216 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-211ENST00000543710 DRAM2Q6UX65 266 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 SUMF1Q8NBK3 374 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 OTOSQ8NHW6 89 aa7.03□□□□□ -1.28
VPS13D-211ENST00000543710 HGDQ93099 445 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms