RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 G3V2T6 193 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 PSMD9O00233 223 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 NDUFA2O43678 99 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 ATP5HO75947 161 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 MRPL3P09001 348 aaKnown RBP13.65□□□□□ -0.22
CCND1-205ENST00000542367 EGR1P18146 543 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 GNALP38405 381 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 UBA52P62987 128 aaKnown RBP13.65□□□□□ -0.22
CCND1-205ENST00000542367 CSNK2BP67870 215 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 POU4F2Q12837 409 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 DOK3Q7L591 496 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 OR8B12Q8NGG6 310 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 LYZL4Q96KX0 146 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
CCND1-205ENST00000542367 PAPOLGQ9BWT3 736 aaKnown RBP13.65□□□□□ -0.22
CCND1-205ENST00000542367 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 RASSF4Q9H2L5 321 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 NIPAL2Q9H841 368 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 RNPEPL1Q9HAU8 725 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 LRP12Q9Y561 859 aa13.65□□□□□ -0.22
CCND1-205ENST00000542367 IGHV3OR15-7A0A075B7D8 119 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 CCDC182A6NF36 153 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 PRKYO43930 277 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 MITFO75030 526 aaPredicted RBP13.64□□□□□ -0.23
CCND1-205ENST00000542367 ACKR3P25106 362 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 PSMA6P60900 246 aaKnown RBP13.64□□□□□ -0.23
CCND1-205ENST00000542367 ATP6AP1Q15904 470 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 SNCBQ16143 134 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 LCN1P1Q5VSP4 162 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 CD276Q5ZPR3 534 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 KCTD18Q6PI47 426 aaPredicted RBP13.64□□□□□ -0.23
CCND1-205ENST00000542367 FAM90A1Q86YD7 464 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 GALNT4Q8N4A0 578 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 FTMTQ8N4E7 242 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 LRRC29Q8WV35 223 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 PIGCQ92535 297 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 ITPKCQ96DU7 683 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 DUX5Q96PT3 197 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 MICU1Q9BPX6 476 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 KRT84Q9NSB2 600 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 MPC1Q9Y5U8 109 aa13.64□□□□□ -0.23
CCND1-205ENST00000542367 SOX21Q9Y651 276 aaPredicted RBP13.64□□□□□ -0.23
CCND1-205ENST00000542367 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 ANXA2P2A6NMY6 339 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 ZNF850A8MQ14 1090 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 CDIPTO14735 213 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 ENSAO43768 121 aaKnown RBP13.63□□□□□ -0.23
CCND1-205ENST00000542367 PLATP00750 562 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 FASP25445 335 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 CFPP27918 469 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 EPHA2P29317 976 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 COMPP49747 757 aaPredicted RBP13.63□□□□□ -0.23
CCND1-205ENST00000542367 FGF12P61328 243 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 IL5RAQ01344 420 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 BAMBIQ13145 260 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 PRDX4Q13162 271 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 TEX36Q5VZQ5 186 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 WDR82Q6UXN9 313 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 BCDIN3DQ7Z5W3 292 aaKnown RBP13.63□□□□□ -0.23
CCND1-205ENST00000542367 AMIGO2Q86SJ2 522 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 PRRG3Q9BZD7 231 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 SMURF1Q9HCE7 757 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
CCND1-205ENST00000542367 TMEM269A0A1B0GVZ9 245 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 M0R129 80 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 DVL1O14640 695 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 TMPRSS2O15393 492 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 FCN3O75636 299 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 CST4P01036 141 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 PRTN3P24158 256 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 EFNB1P98172 346 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 MICBQ29980 383 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 KDM4DQ6B0I6 523 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 DEGS2Q6QHC5 323 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 C9orf139Q6ZV77 190 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 MEPCEQ7L2J0 689 aaKnown RBP13.62□□□□□ -0.23
CCND1-205ENST00000542367 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 OR5P3Q8WZ94 311 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 DUS3LQ96G46 650 aaKnown RBP13.62□□□□□ -0.23
CCND1-205ENST00000542367 RTL8AQ9BWD3 113 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 MROQ9BYG7 248 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 FAM206AQ9NX38 181 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 H2AFY2Q9P0M6 372 aaPredicted RBP13.62□□□□□ -0.23
CCND1-205ENST00000542367 COPS3Q9UNS2 423 aa13.62□□□□□ -0.23
CCND1-205ENST00000542367 DNAJC9-AS1A6NH13 148 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ACOD1A6NK06 481 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ZAR1LA6NP61 321 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 PRR32B1ATL7 298 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 LIPFP07098 398 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 MUC1P15941 1255 aaPredicted RBP13.61□□□□□ -0.23
CCND1-205ENST00000542367 CFHR2P36980 270 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 MTNR1AP48039 350 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ELF3P78545 371 aaPredicted RBP13.61□□□□□ -0.23
CCND1-205ENST00000542367 ROM1Q03395 351 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 BTN2A1Q7KYR7 527 aa13.61□□□□□ -0.23
CCND1-205ENST00000542367 ZNF679Q8IYX0 411 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms