RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FEVQ99581 238 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 CHIAQ9BZP6 476 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 OR10A2Q9H208 303 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 ACOXLQ9NUZ1 547 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 ZNF319Q9P2F9 582 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 RPUSD1Q9UJJ7 312 aaKnown RBP13.91□□□□□ -0.18
CPSF1-207ENST00000531727 PRPF19Q9UMS4 504 aaKnown RBP13.91□□□□□ -0.18
CPSF1-207ENST00000531727 POMT1Q9Y6A1 747 aa13.91□□□□□ -0.18
CPSF1-207ENST00000531727 IGHV1-69DA0A0B4J2H0 117 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 A0A1B0GUS0 222 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CST1P01037 141 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 IGHV1-69P01742 117 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CRYBA1P05813 215 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 H2BFMP0C1H6 154 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 PAICSP22234 425 aaKnown RBP13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CALB2P22676 271 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 GNALP38405 381 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 ARF6P62330 175 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CSNK2BP67870 215 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 SNCBQ16143 134 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 GFOD2Q3B7J2 385 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 WDR38Q5JTN6 314 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 WDR82Q6UXN9 313 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 OR4F5Q8NH21 305 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 SSMEM1Q8WWF3 244 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 PGAM5Q96HS1 289 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 LRGUKQ96M69 825 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CCT8L2Q96SF2 557 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 CCL13Q99616 98 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 PAPOLGQ9BWT3 736 aaKnown RBP13.9□□□□□ -0.18
CPSF1-207ENST00000531727 RGCCQ9H4X1 137 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 PPP1R3EQ9H7J1 279 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 BRD7Q9NPI1 651 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 RHBDD3Q9Y3P4 386 aa13.9□□□□□ -0.18
CPSF1-207ENST00000531727 A0A1B0GW55 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L2P0CJ85 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L3P0CJ86 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L4P0CJ87 422 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L5P0CJ88 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L6P0CJ89 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L7P0CJ90 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-207ENST00000531727 RAG2P55895 527 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 IL5RAQ01344 420 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4L9Q6RFH8 374 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-207ENST00000531727 TREML4Q6UXN2 200 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 SLC36A1Q7Z2H8 476 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-207ENST00000531727 FGFRL1Q8N441 504 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 FTMTQ8N4E7 242 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 OTOSQ8NHW6 89 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 MICU1Q9BPX6 476 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 CHID1Q9BWS9 393 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 TLNRD1Q9H1K6 362 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 OR51V1Q9H2C8 321 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 CNTD2Q9H8S5 307 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 BEX1Q9HBH7 125 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 C1RLQ9NZP8 487 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 DUX4Q9UBX2 424 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 MPC1Q9Y5U8 109 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 KPTNQ9Y664 436 aa13.89□□□□□ -0.19
CPSF1-207ENST00000531727 CMYA5Q8N3K9 4069 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 MGAM2Q2M2H8 2515 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ANXA2P2A6NMY6 339 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 PRR23D1E9PI22 279 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 CDIPTO14735 213 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 NDUFA7O95182 113 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 KNG1P01042 644 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 LYNP07948 512 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 PRR23D2P0DMB1 279 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 T-ENOLP0DO92 83 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 RPL15P61313 204 aaKnown RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ELF3P78545 371 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 RELBQ01201 579 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 CDONQ4KMG0 1287 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ADGRG5Q8IZF4 528 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 KIR3DL3Q8N743 410 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ZNF454Q8N9F8 522 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 LY6G5BQ8NDX9 201 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 TBC1D15Q8TC07 691 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 WFDC12Q8WWY7 111 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 C12orf43Q96C57 262 aaKnown RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 CCDC124Q96CT7 223 aaKnown RBP13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ITPKCQ96DU7 683 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
CPSF1-207ENST00000531727 ACOT8O14734 319 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 PRODHO43272 600 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 KCNAB3O43448 404 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 SELENOFO60613 162 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 POU1F1P28069 291 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 PRDX4Q13162 271 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 GINS1Q14691 196 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 STUMQ69YW2 141 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 PLBD1Q6P4A8 553 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 TMEM179BQ7Z7N9 219 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 LDLRAD3Q86YD5 345 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms