RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 TRAV27A0A087WT01 109 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 UNC119BA6NIH7 251 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 OR5H1A6NKK0 313 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CYSRT1A8MQ03 144 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 DEFB108AA8MXU0 73 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF587BE7ETH6 402 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 M0QZK8 103 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 M0R3G1 203 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 LGALS8O00214 317 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SCGB2A1O75556 95 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 RAD51DO75771 328 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SCO1O75880 301 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MPIG6BO95866 241 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GASTP01350 101 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 IGHMP01871 453 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MT-ND2P03891 347 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GRPP07492 148 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 PGA4P0DJD7 388 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 PGA3P0DJD8 388 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CCL2P13500 99 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF26P17031 533 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 IFNGR2P38484 337 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 NR4A2P43354 598 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 FXYD6P3P58550 94 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 RPL27P61353 136 aaKnown RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 RIPPLY1Q0D2K3 151 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 PPP1R8Q12972 351 aaKnown RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MAB21L1Q13394 359 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GK3PQ14409 553 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF273Q14593 569 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MELKQ14680 651 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ACKR1Q16570 336 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 HIST3H3Q16695 136 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MICAQ29983 383 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 PAN3Q58A45 887 aaKnown RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 C9orf135Q5VTT2 229 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CARD17Q5XLA6 110 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF770Q6IQ21 691 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CFAP77Q6ZQR2 320 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SSX8Q7RTT4 187 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF573Q86YE8 665 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 C17orf78Q8N4C9 275 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 WDR31Q8NA23 367 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 OR1K1Q8NGR3 316 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 OR6N1Q8NGY5 312 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GNPDA2Q8TDQ7 276 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MRGPRDQ8TDS7 321 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 NEK7Q8TDX7 302 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ASB10Q8WXI3 467 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 BCL2L2Q92843 193 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 STMN2Q93045 179 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MUCL1Q96DR8 90 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 FOXN4Q96NZ1 517 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 ZNF184Q99676 751 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MND1Q9BWT6 205 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MROQ9BYG7 248 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CCDC90BQ9GZT6 254 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 RBM38Q9H0Z9 239 aaKnown RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 DNTTIP1Q9H147 329 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 REEP1Q9H902 201 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GPR35Q9HC97 309 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CCNB1IP1Q9NPC3 277 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 KRCC1Q9NPI7 259 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 VNN3Q9NY84 501 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SLCO1C1Q9NYB5 712 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 CCDC59Q9P031 241 aaKnown RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SLC25A10Q9UBX3 287 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 MGAT4BQ9UQ53 548 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 GRIP1Q9Y3R0 1128 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 SLC25A15Q9Y619 301 aa5.46□□□□□ -1.53
ATPAF1-209ENST00000529214 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.54
ATPAF1-209ENST00000529214 PTPN13Q12923 2485 aa5.46□□□□□ -1.54
ATPAF1-209ENST00000529214 HELTA6NFD8 242 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 ZNF99A8MXY4 864 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 MCIDASD6RGH6 385 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 GNGT2O14610 69 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 ABCD4O14678 606 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 FKBP6O75344 327 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 NDUFB2O95178 105 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 IGHG1P01857 330 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 CD14P08571 375 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 CDH2P19022 906 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 FPR3P25089 353 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 LOXP28300 417 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 MAP2K3P46734 347 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 CSNK1A1P48729 337 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 DAP3P51398 398 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 ZNF133P52736 654 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 KRTAP10-9P60411 292 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 EGR3Q06889 387 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 SCN1BQ07699 218 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 GAGE1Q13065 139 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 ASAH1Q13510 395 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 CCNIQ14094 377 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 OXA1LQ15070 435 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 SNAPC1Q16533 368 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 CEACAM16Q2WEN9 425 aa5.45□□□□□ -1.54
ATPAF1-209ENST00000529214 RFX4Q33E94 735 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms