RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ELL3Q9HB65 397 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 HAO2Q9NYQ3 351 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 SLC25A10Q9UBX3 287 aaPredicted RBP16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 WI2-2373I1.2A0A1W2PRP0 233 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 A0A1W2PRX2 142 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 PSKH1P11801 424 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 MSX2P35548 267 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 NAA10P41227 235 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 SEC23BQ15437 767 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 ATPAF1Q5TC12 328 aaPredicted RBP16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 DRAM2Q6UX65 266 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 SDR9C7Q8NEX9 313 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 C12orf43Q96C57 262 aaKnown RBP16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 WWC2-AS2Q96NR7 200 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 ANKRD19PQ9H560 264 aa16.48■□□□□ 0.23
SQSTM1-215ENST00000514093 TRBV4-1A0A0J9YWV2 114 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 TVP23AA6NH52 213 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 H0YAE9 185 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 NPPAP01160 153 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 H1F0P07305 194 aaKnown RBP16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 ZNF823P16415 610 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 OTX1P32242 354 aaPredicted RBP16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 BLMHQ13867 455 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 LYPD4Q6UWN0 246 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 CBLL1Q75N03 491 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 CYP4Z1Q86W10 505 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 WFDC9Q8NEX5 89 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 GAFA1Q96PS6 74 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 ENPP4Q9Y6X5 453 aa16.47■□□□□ 0.23
SQSTM1-215ENST00000514093 CXCR6O00574 342 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 PYCR1P32322 319 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 GSK3BP49841 420 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 RAB13P51153 203 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 KRTAP10-11P60412 298 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 PLA1AQ53H76 456 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 COQ5Q5HYK3 327 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 AGBL2Q5U5Z8 902 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 ZNF788Q6ZQV5 615 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 OR52J3Q8NH60 311 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 FANK1Q8TC84 345 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 COPS4Q9BT78 406 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 CENPMQ9NSP4 180 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
SQSTM1-215ENST00000514093 A0A1W2PRQ8 180 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 NKX6-3A6NJ46 265 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 TBX1O43435 398 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 SERPINA1P01009 418 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 FAM3AP98173 230 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 DGCR6Q14129 220 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 AANATQ16613 207 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 SLC35F1Q5T1Q4 408 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 METTL21CQ5VZV1 264 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 SLC16A9Q7RTY1 509 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 DCXRQ7Z4W1 244 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 MKXQ8IYA7 352 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 WIPF2Q8TF74 440 aaPredicted RBP16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 ZNRF4Q8WWF5 429 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 RPL3LQ92901 407 aaKnown RBP16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 MED30Q96HR3 178 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 RAB3IPQ96QF0 476 aaPredicted RBP16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 DDOQ99489 341 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 IFT27Q9BW83 186 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 OR52D1Q9H346 318 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 GID8Q9NWU2 228 aa16.45■□□□□ 0.22
SQSTM1-215ENST00000514093 AKR7A2O43488 359 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 PEX14O75381 377 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 DIRAS1O95057 198 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 NOS3P29474 1203 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 SLC6A6P31641 620 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 DDOSTP39656 456 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 CD69Q07108 199 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 KLF10Q13118 480 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 TAF13Q15543 124 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 LIAT1Q6ZQX7 453 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 FAM185AQ8N0U4 392 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 DTX3Q8N9I9 347 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 OR5D13Q8NGL4 314 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 ANGPTL6Q8NI99 470 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 SPSB4Q96A44 273 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 KCNG2Q9UJ96 466 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 RHBDD3Q9Y3P4 386 aa16.44■□□□□ 0.22
SQSTM1-215ENST00000514093 BBIP1A8MTZ0 92 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 ARPC3O15145 178 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 GSTA4O15217 222 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 SIGLEC5O15389 551 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 XRCC2O43543 280 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 TIPRLO75663 272 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 SLC7A2P52569 658 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 MXRA7P84157 204 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 LIPEQ05469 1076 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■□□ 15.3
SQSTM1-215ENST00000514093 Q6ZS46 218 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 TMEM219Q86XT9 240 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 ZDHHC21Q8IVQ6 265 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 Q8N2B8 174 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 OR51L1Q8NGJ5 315 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 SGK3Q96BR1 496 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 KCNJ15Q99712 375 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 CDCA4Q9BXL8 241 aa16.43■□□□□ 0.22
SQSTM1-215ENST00000514093 DNTTIP1Q9H147 329 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms