RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 POU1F1P28069 291 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 CFHR2P36980 270 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF121P58317 390 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM3AP98173 230 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 IL5RAQ01344 420 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 POU4F2Q12837 409 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 BBS1Q8NFJ9 593 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 LRRC29Q8WV35 223 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 TMIGD2Q96BF3 282 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 SGK3Q96BR1 496 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 WDFY2Q96P53 400 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 THTPAQ9BU02 230 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 FGF23Q9GZV9 251 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 RASSF4Q9H2L5 321 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF696Q9H7X3 374 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 YY1AP1Q9H869 796 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 DOCK11Q5JSL3 2073 aa11.11□□□□□ -0.63
CTDSP1-212ENST00000494067 hCG_38984A0A1B0GV85 526 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 SRRM5B3KS81 715 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 DVL1O14640 695 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 SELENOFO60613 162 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 E2F6O75461 281 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 LYNP07948 512 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 PRKACGP22612 351 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 GSK3AP49840 483 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 PRR31Q5SQ13 230 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 BTN2A1Q7KYR7 527 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM90A1Q86YD7 464 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF454Q8N9F8 522 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 SCCPDHQ8NBX0 429 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 OR1M1Q8NGA1 313 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 TBC1D15Q8TC07 691 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 ST8SIA4Q92187 359 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 SLC7A6OSQ96CW6 309 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 RTL8AQ9BWD3 113 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 SLITRK2Q9H156 845 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 C1orf21Q9H246 121 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 PRDM13Q9H4Q3 707 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 CNTD2Q9H8S5 307 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 BEX1Q9HBH7 125 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 TNFRSF19Q9NS68 423 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 ACOXLQ9NUZ1 547 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 PDP1Q9P0J1 537 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 KAAG1Q9UBP8 84 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 MPC1Q9Y5U8 109 aa11.1□□□□□ -0.63
CTDSP1-212ENST00000494067 IGHV3OR15-7A0A075B7D8 119 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 AQP12BA6NM10 295 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 PRR32B1ATL7 298 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 GPR37O15354 613 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 NDUFB3O43676 98 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 LHBP01229 141 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 SFTPBP07988 381 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 OPRL1P41146 370 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 ARF6P62330 175 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 CSNK2BP67870 215 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 GINS1Q14691 196 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 RUSC1-AS1Q66K80 236 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 PLBD1Q6P4A8 553 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 Q6YL49 198 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 AQP12AQ8IXF9 295 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 CMTM4Q8IZR5 234 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 OR4F5Q8NH21 305 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 C12orf43Q96C57 262 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 DNAJB11Q9UBS4 358 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 ZNF391Q9UJN7 358 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 POMT1Q9Y6A1 747 aa11.09□□□□□ -0.63
CTDSP1-212ENST00000494067 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 A0A1B0GVI7 797 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 TMEM210A6NLX4 147 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 CDIPTO14735 213 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 PRODHO43272 600 aa11.08□□□□□ -0.64
CTDSP1-212ENST00000494067 KNG1P01042 644 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms