RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PROK2Q9HC23 129 aa16.15■□□□□ 0.18
POLR2J3-205ENST00000489144 NRIP3Q9NQ35 241 aa16.15■□□□□ 0.18
POLR2J3-205ENST00000489144 hCG_1809904A0A1W2PP81 198 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 A0A1W2PR64 198 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 A0A1W2PRV1 198 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 BCL2L11O43521 198 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 CD79AP11912 226 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 CELP19835 753 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 RPS27P42677 84 aaKnown RBP16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 OR10K2Q6IF99 312 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 WDFY1Q8IWB7 410 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 NPEPL1Q8NDH3 523 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 ASB13Q8WXK3 278 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 SMPDL3BQ92485 455 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 SRA1Q9HD15 236 aaKnown RBP16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 MMP26Q9NRE1 261 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 HIF3AQ9Y2N7 669 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 EXOSC1Q9Y3B2 195 aaKnown RBP16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 CTDSPLO15194 276 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 ADH6P28332 368 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 PLPPR5Q32ZL2 321 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 IL34Q6ZMJ4 242 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 DPY19L2P2Q6ZN68 376 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 ASCL5Q7RTU5 278 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 LRRC75AQ8NAA5 344 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 SMIM4Q8WVI0 70 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 RCE1Q9Y256 329 aa16.14■□□□□ 0.17
POLR2J3-205ENST00000489144 IRGMA1A4Y4 181 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 A8MVM7 634 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 SPINK14Q6IE38 97 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 LPCAT3Q6P1A2 487 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 LINC00696Q6ZRV3 163 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 ZNF485Q8NCK3 441 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 NKD1Q969G9 470 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 CPNE2Q96FN4 548 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 HES7Q9BYE0 225 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 PLA2G3Q9NZ20 509 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 MRPL15Q9P015 296 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 DMXL2Q8TDJ6 3036 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 TP53I11O14683 189 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 CIDEAO60543 219 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 RAB40ALP0C0E4 278 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 KIAA0141Q14154 515 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 SCGB2B2Q4G0G5 96 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 MESTQ5EB52 335 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 SFXN4Q6P4A7 337 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 OPN5Q6U736 354 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 GTPBP8Q8N3Z3 284 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 OR51S1Q8NGJ8 323 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 SPRYD4Q8WW59 207 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 OIT3Q8WWZ8 545 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 TMEM234Q8WY98 164 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 PSMF1Q92530 271 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 SMAD5Q99717 465 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 RPS10P5Q9NQ39 176 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 MRPS18AQ9NVS2 196 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 CAMK2AQ9UQM7 478 aa16.13■□□□□ 0.17
POLR2J3-205ENST00000489144 GOSR2O14653 212 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 NPIPB7O75200 414 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 AHSA1O95433 338 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 CYC1P08574 325 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 SLC2A5P22732 501 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 NOVA1P51513 510 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 PRPS1P60891 318 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 PJVKQ0ZLH3 352 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 DCAF12L2Q5VW00 463 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 OR2AK2Q8NG84 335 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 RNF138Q8WVD3 245 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 MOKQ9UQ07 419 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 A0A1W2PPH5 198 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 SEC14L6B5MCN3 397 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 ITGB1BP1O14713 200 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 SOX15O60248 233 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 CYTIPO60759 359 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 CBR3O75828 277 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 OR2F2O95006 317 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 CD14P08571 375 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 OR2F1Q13607 317 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 ZNF345Q14585 488 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 GID4Q8IVV7 300 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 OR52B4Q8NGK2 314 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 PAQR8Q8TEZ7 354 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 FOXRED1Q96CU9 486 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 ZNF649Q9BS31 505 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 ADGRL4Q9HBW9 690 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 GRHPRQ9UBQ7 328 aa16.12■□□□□ 0.17
POLR2J3-205ENST00000489144 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 TVP23AA6NH52 213 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 SULT2B1O00204 365 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 HSPA12AO43301 675 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 RPTNQ6XPR3 784 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 PRSS45Q7RTY3 260 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 OR56B1Q8NGI3 324 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 OR5R1Q8NH85 324 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 SYT4Q9H2B2 425 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 AUNIPQ9H7T9 357 aa16.11■□□□□ 0.17
POLR2J3-205ENST00000489144 FKRPQ9H9S5 495 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms