RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	OPALIN	Q96PE5	141 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	COMMD4	Q9H0A8	199 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF442	Q9H7R0	627 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	ISYNA1	Q9NPH2	558 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	SCOC	Q9UIL1	159 aa		11.17	□□□□□ -0.62
NR1H3-223	ENST00000486991	TMEM212	A6NML5	194 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR4C45	A6NMZ5	311 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	F12	P00748	615 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	UBC	P0CG48	685 aa	Known RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	THBS4	P35443	961 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	RPS23	P62266	143 aa	Known RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF92	Q03936	586 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	HLX	Q14774	488 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	EFNB3	Q15768	340 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	KRTAP24-1	Q3LI83	254 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	LIPK	Q5VXJ0	399 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	DMKN	Q6E0U4	476 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	MRPL21	Q7Z2W9	205 aa	Known RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	RDH10	Q8IZV5	341 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR5AK2	Q8NH90	309 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	SGK3	Q96BR1	496 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	SMIM19	Q96E16	107 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	PDCD1LG2	Q9BQ51	273 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR2J1	Q9GZK6	312 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	RAB1B	Q9H0U4	201 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	GPR84	Q9NQS5	396 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991	FZR1	Q9UM11	496 aa		11.16	□□□□□ -0.62
NR1H3-223	ENST00000486991		A0A0U1RQV5	110 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991		A0A1B0GVI7	797 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	LOC107986453	A0A1B0GWG9	222 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	NDUFS8	O00217	210 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZFPL1	O95159	310 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR4A8	P0C604	315 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	FAM157C	P0CG43	387 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	CPE	P16870	476 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF16	P17020	682 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	JUNB	P17275	347 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	GCH1	P30793	250 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	GLRX	P35754	106 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	PDLIM4	P50479	330 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	GP2	P55259	537 aa	Known RBP	11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	PRSS12	P56730	875 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	TPBG	Q13641	420 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	GK2	Q14410	553 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF718	Q3SXZ3	478 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	SYT6	Q5T7P8	510 aa	Predicted RBP	11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	TMEM244	Q5VVB8	128 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	PGAP1	Q75T13	922 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	C1orf174	Q8IYL3	243 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	RPS4Y2	Q8TD47	263 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	GHSR	Q92847	366 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	LYZL4	Q96KX0	146 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991	PLK3	Q9H4B4	646 aa		11.15	□□□□□ -0.62
NR1H3-223	ENST00000486991		A0A1B0GTI1	187 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	GGT3P	A6NGU5	568 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	SYT7	O43581	403 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	PLPP2	O43688	288 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	IGHV4-31	P0DP07	118 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	ACHE	P22303	614 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	TUBG1	P23258	451 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	CFL1	P23528	166 aa	Known RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	MPV17	P39210	176 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	PPOX	P50336	477 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	LOXL1	Q08397	574 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	DOK3	Q7L591	496 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR10AC1	Q8NH08	325 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	KLF14	Q8TD94	323 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	NEU4	Q8WWR8	484 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	CMBL	Q96DG6	245 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	MARS2	Q96GW9	593 aa	Known RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	PGLYRP3	Q96LB9	341 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	SORCS2	Q96PQ0	1159 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	VRK1	Q99986	396 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	SOX7	Q9BT81	388 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	TMED9	Q9BVK6	235 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	BEX2	Q9BXY8	128 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	RGCC	Q9H4X1	137 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	OPA3	Q9H6K4	179 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	TUBG2	Q9NRH3	451 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	DUSP13	Q9UII6	198 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZNF391	Q9UJN7	358 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZNF281	Q9Y2X9	895 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	CMAHP	Q9Y471	501 aa		11.14	□□□□□ -0.63
NR1H3-223	ENST00000486991	CCRL2	O00421	344 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	IGLV3-1	P01715	115 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	ISG15	P05161	165 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	TFAP2A	P05549	437 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	RAC2	P15153	192 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	LIPA	P38571	399 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	GSK3A	P49840	483 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	RPS25	P62851	125 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	FAM3A	P98173	230 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	GPR50	Q13585	617 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	SSX1	Q16384	188 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR2T2	Q6IF00	324 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	FBXW12	Q6X9E4	464 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR51A4	Q8NGJ6	313 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR13C3	Q8NGS6	347 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms