RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	SEMA6D	Q8NFY4	1073 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	OR52N1	Q8NH53	320 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	DVL3	Q92997	716 aa	Predicted RBP	10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	OR2V2	Q96R30	315 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	ADAT1	Q9BUB4	502 aa	Known RBP	10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	PAPOLG	Q9BWT3	736 aa	Known RBP	10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	DUSP21	Q9H596	190 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	PPP1R3E	Q9H7J1	279 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	UBAP1	Q9NZ09	502 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	TPRKB	Q9Y3C4	175 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	CACNG2	Q9Y698	323 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061		V9GYS6	101 aa		10.84	□□□□□ -0.67
RBM28-204	ENST00000478061	IGHV3-64D	A0A0J9YX35	117 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061		A0A1B0GVI7	797 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	LOC107986453	A0A1B0GWG9	222 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	NDUFS8	O00217	210 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	SYT7	O43581	403 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	MTRF1	O75570	445 aa	Known RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	UBC	P0CG48	685 aa	Known RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	FAH	P16930	419 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	TNFRSF1A	P19438	455 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	ACHE	P22303	614 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	GIF	P27352	417 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	CD200	P41217	278 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	TGM4	P49221	684 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	SRP9	P49458	86 aa	Known RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	GTF2A1	P52655	376 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	RIPPLY1	Q0D2K3	151 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	HNRNPA0	Q13151	305 aa	Known RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	MAB21L1	Q13394	359 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	RIN1	Q13671	783 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	ZBTB37	Q5TC79	503 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	XAF1	Q6GPH4	301 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	DOK3	Q7L591	496 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	FTMT	Q8N4E7	242 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	CELF2-AS1	Q8N7Q2	184 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	OR14K1	Q8NGZ2	314 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	HAVCR2	Q8TDQ0	301 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	GATAD2B	Q8WXI9	593 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	MYDGF	Q969H8	173 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	CDCA4	Q9BXL8	241 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	CHODL	Q9H9P2	273 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	DLL4	Q9NR61	685 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	BABAM2	Q9NXR7	383 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	ERVK-18	Q9QC07	812 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	PIGL	Q9Y2B2	252 aa		10.83	□□□□□ -0.68
RBM28-204	ENST00000478061	CHD3	Q12873	2000 aa	Known RBP	10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	DHRS7C	A6NNS2	312 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	ZNF850	A8MQ14	1090 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	VWC2L	B2RUY7	222 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061		H3BSH0	61 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	ZFPL1	O95159	310 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	LALBA	P00709	142 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	ISG15	P05161	165 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	GNAL	P38405	381 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	TMEM33	P57088	247 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	PRDX4	Q13162	271 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	IRF3	Q14653	427 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	CCDC58	Q4VC31	144 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	RBM48	Q5RL73	367 aa	Known RBP	10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	TMEM244	Q5VVB8	128 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	RNLS	Q5VYX0	342 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	RPL22L1	Q6P5R6	122 aa	Known RBP	10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	NANOGP1	Q8N7R0	232 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	SPERT	Q8NA61	448 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	OR10AC1	Q8NH08	325 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	OR8S1	Q8NH09	359 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	PIGC	Q92535	297 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	ITPKC	Q96DU7	683 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	REG4	Q9BYZ8	158 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	BPESC1	Q9GZL8	116 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	GCM1	Q9NP62	436 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	TREM2	Q9NZC2	230 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	ENPP5	Q9UJA9	477 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	MPC1	Q9Y5U8	109 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.82	□□□□□ -0.68
RBM28-204	ENST00000478061	CELSR1	Q9NYQ6	3014 aa		10.82	□□□□□ -0.68
RBM28-204	ENST00000478061		A0A096LNT2	108 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	LOC100289279	A0A1B0GTE1	492 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	TMEM212	A6NML5	194 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	RNF223	E7ERA6	249 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061		H7C1Q1	480 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	MYL12B	O14950	172 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	OGG1	O15527	345 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	LMX1B	O60663	402 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	PTBP3	O95758	552 aa	Known RBP	10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	SLC25A16	P16260	332 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	RBMX	P38159	391 aa	Known RBP	10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	PMEL	P40967	661 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	NR4A2	P43354	598 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	GATA4	P43694	442 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	DOC2B	Q14184	412 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	HFE	Q30201	348 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	PRAMEF6	Q5VXH4	476 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	TMEM42	Q69YG0	159 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	MOGAT3	Q86VF5	341 aa		10.81	□□□□□ -0.68
RBM28-204	ENST00000478061	CIART	Q8N365	385 aa	Predicted RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms