RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 HLA-DOBP13765 273 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 HSD17B1P14061 328 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PVRP15151 417 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF250P15622 560 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 BCL3P20749 454 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ME2P23368 584 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CERS1P27544 350 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 HTR1DP28221 377 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 GNRHRP30968 328 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CEACAM8P31997 349 aaPredicted RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DCTP40126 519 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PTGDSP41222 190 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 SELENOPP49908 381 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 HCCSP53701 268 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 LINC00310P59036 64 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 RAB8AP61006 207 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 SPCS3P61009 180 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 RPS14P62263 151 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 RPS27AP62979 156 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 MRPS11P82912 194 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DHODHQ02127 395 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 RPL18AQ02543 176 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CD164Q04900 197 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 LTBQ06643 244 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 FOXF2Q12947 444 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 FOXI1Q12951 378 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DYNC1I2Q13409 638 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 KIR2DS1Q14954 304 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ARL6IP1Q15041 203 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ECSCRQ19T08 205 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF658BQ4V348 819 aaPredicted RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 SPIN4Q56A73 249 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 FAM120AOSQ5T036 256 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TPTE2P1Q5T6R2 138 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 WDR25Q64LD2 544 aaPredicted RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OLFML2AQ68BL7 652 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 HBMQ6B0K9 141 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF544Q6NX49 715 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 LCLAT1Q6UWP7 414 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TREML4Q6UXN2 200 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TFAP2EQ6VUC0 442 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 Q6YL49 198 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ISCA2Q86U28 154 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 LHFPL3Q86UP9 236 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 SLC51BQ86UW2 128 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 WDFY1Q8IWB7 410 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 KIR2DL5AQ8N109 375 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM199Q8N511 208 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 NANOGP1Q8N7R0 232 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 SAMD12Q8N8I0 201 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ACOT4Q8N9L9 421 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PXT1Q8NFP0 134 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 BEST4Q8NFU0 473 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR2T33Q8NG76 320 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR8G5Q8NG78 346 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR1M1Q8NGA1 313 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR10G8Q8NGN5 311 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR8U1Q8NH10 309 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR2V1Q8NHB1 315 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 KIR2DL5BQ8NHK3 375 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 IL17DQ8TAD2 202 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 FNDC8Q8TC99 324 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 BLOC1S5Q8TDH9 187 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 NEK7Q8TDX7 302 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 IGFBPL1Q8WX77 278 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DYRK2Q92630 601 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 EEF1AKMT3Q96AZ1 226 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ANKRD9Q96BM1 317 aaPredicted RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 NTNG2Q96CW9 530 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PAGE5Q96GU1 130 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM80Q96HE8 168 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 MS4A14Q96JA4 679 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 C2orf48Q96LS8 159 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 OR5B12Q96R08 314 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TBX15Q96SF7 602 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CGREF1Q99674 301 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 NIPSNAP1Q9BPW8 284 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DHRS9Q9BPW9 319 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 KLHDC3Q9BQ90 382 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 DUSP26Q9BV47 211 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 MLST8Q9BVC4 326 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 NXF2Q9GZY0 626 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 HOXD1Q9GZZ0 328 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CHRNA10Q9GZZ6 450 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TLNRD1Q9H1K6 362 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PRORYQ9H606 182 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF442Q9H7R0 627 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ACOT13Q9NPJ3 140 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TIGARQ9NQ88 270 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 EXOSC3Q9NQT5 275 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 COMMD9Q9P000 198 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 IL17CQ9P0M4 197 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 RAB26Q9ULW5 256 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 PPP2R2CQ9Y2T4 447 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TESMINQ9Y4I5 508 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 CPQQ9Y646 472 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 TDRD15B5MCY1 1934 aaKnown RBP2.4□□□□□ -2.03
HMGN4-202ENST00000477243 ZSWIM8A7E2V4 1837 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 MROH7Q68CQ1 1323 aa2.4□□□□□ -2.03
HMGN4-202ENST00000477243 A0A1W2PP64 1363 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms