RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 Q7L0L9 218 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 YRDCQ86U90 279 aaKnown RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 NAA40Q86UY6 237 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 OR2G3Q8NGZ4 309 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ANKRD10Q9NXR5 420 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 TRAPPC2LQ9UL33 140 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 TSC2P49815 1807 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 KISS1Q15726 138 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF362Q5T0B9 420 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-206ENST00000445265 UNQ9370/PRO34162Q6UXP9 181 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ASB10Q8WXI3 467 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 SPSB1Q96BD6 273 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 REEP6Q96HR9 211 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 ARHGAP5-AS1Q96IT6 56 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 LHX6Q9UPM6 363 aa14.86□□□□□ -0.03
TCOF1-206ENST00000445265 RECKO95980 971 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 GLI4P10075 376 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 TCN2P20062 427 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 AGFG1P52594 562 aaKnown RBP14.85□□□□□ -0.03
TCOF1-206ENST00000445265 PIGPP57054 158 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 KISS1RQ969F8 398 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-206ENST00000445265 PARP12Q9H0J9 701 aaKnown RBP14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CALHM2Q9HA72 323 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 KLHDC2Q9Y2U9 406 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 TRBV5-5A0A0J9YX44 114 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 RER1O15258 196 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 SHOXO15266 292 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 OIP5O43482 229 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 LRP3O75074 770 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 THY1P04216 161 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 LRP5LA4QPB2 252 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 H7C1Q1 480 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 XRCC2O43543 280 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 TMEM88Q6PEY1 159 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF485Q8NCK3 441 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 BVESQ8NE79 360 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CXorf58Q96LI9 332 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CA10Q9NS85 328 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CSF2RBP32927 897 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CATR1Q13166 79 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 ANKRD37Q7Z713 158 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 TMEM217Q8N7C4 229 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 ZNF321PQ8N8H1 164 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 NUBPLQ8TB37 319 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 SLC25A38Q96DW6 304 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 LINC00052Q96N35 136 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 CHST6Q9GZX3 395 aa14.85□□□□□ -0.03
TCOF1-206ENST00000445265 NME2P1O60361 137 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 FOSL2P15408 326 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 FCARP24071 287 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 PTGFRP43088 359 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 ERVK-16P61578 105 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 LPAL2Q16609 132 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 KCNE4Q8WWG9 221 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 TCRBV16S1A1N1A0A5B0 115 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 CBR3O75828 277 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 NXPH1P58417 271 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 GVQW1Q8N7I0 195 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 BPIFCQ8NFQ6 507 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 OR10G3Q8NGC4 313 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 UBE2ZQ9H832 354 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-206ENST00000445265 RHOFQ9HBH0 211 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 MAP1BP46821 2468 aaKnown RBP14.84□□□□□ -0.03
TCOF1-206ENST00000445265 GCH1P30793 250 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 EFNB2P52799 333 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.84□□□□□ -0.03
TCOF1-206ENST00000445265 OR1S2Q8NGQ3 325 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 ARL5BQ96KC2 179 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 SUCNR1Q9BXA5 334 aa14.84□□□□□ -0.03
TCOF1-206ENST00000445265 MMP16P51512 607 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 ST7LQ8TDW4 575 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 GNPNAT1Q96EK6 184 aaPredicted RBP14.83□□□□□ -0.03
TCOF1-206ENST00000445265 CCDC74BQ96LY2 380 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 MENTQ9BUN1 341 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 MYOTQ9UBF9 498 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 SPTBP11277 2137 aa14.83□□□□□ -0.03
TCOF1-206ENST00000445265 OR6C6A6NF89 314 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 TTLL8A6PVC2 850 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 CDC14BO60729 498 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 NGFRP08138 427 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 CD37P11049 281 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 MYF5P13349 255 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 DSCR4P56555 118 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RPP30P78346 268 aaKnown RBP14.83□□□□□ -0.04
TCOF1-206ENST00000445265 HIST2H3AQ71DI3 136 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RPS4Y2Q8TD47 263 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 MCHR2Q969V1 340 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 PTX4Q96A99 478 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 RAB9BQ9NP90 201 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 OR14J1Q9UGF5 321 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 TNFSF12O43508 249 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 DHRS3O75911 302 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 IGF2P01344 180 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 H2AFB1P0C5Y9 115 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 KIR3DL2P43630 455 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 PJVKQ0ZLH3 352 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 SLC25A42Q86VD7 318 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 OR5T1Q8NG75 326 aa14.83□□□□□ -0.04
TCOF1-206ENST00000445265 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms