RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CSAG2Q9Y5P2 127 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 ICMTO60725 284 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 CDC14BO60729 498 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 NAT2P11245 290 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 RCVRNP35243 200 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 RBMS2Q15434 407 aaKnown RBP16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 DEFB109BQ30KR1 87 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 METTL11BQ5VVY1 283 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 STEAP1BQ6NZ63 245 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 PLXDC2Q6UX71 529 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 ZNF782Q6ZMW2 699 aaPredicted RBP16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 Q6ZTK2 550 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 NUFIP2Q7Z417 695 aaKnown RBP16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 NOXA1Q86UR1 476 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 LIX1LQ8IVB5 337 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 GABRG1Q8N1C3 465 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 ZNF486Q96H40 463 aaPredicted RBP16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 MED30Q96HR3 178 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 DMRTB1Q96MA1 342 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 URM1Q9BTM9 101 aaKnown RBP16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 C1QTNF5Q9BXJ0 243 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 CST11Q9H112 138 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 LPAR5Q9H1C0 372 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 GLRX2Q9NS18 164 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 NKIRAS2Q9NYR9 191 aa16.44■□□□□ 0.22
SEMA3D-202ENST00000444867 ARR3P36575 388 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 PTGFRP43088 359 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 CNN3Q15417 329 aaKnown RBP16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 RNF144BQ7Z419 303 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 CHST4Q8NCG5 386 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 TMEM59Q9BXS4 323 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 OR10A4Q9H209 315 aa16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 TP63Q9H3D4 680 aaPredicted RBP16.43■□□□□ 0.22
SEMA3D-202ENST00000444867 ARPC1BO15143 372 aaKnown RBP16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 MPIG6BO95866 241 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 CYB5AP00167 134 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 IL5P05113 134 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 GSTP1P09211 210 aaKnown RBP16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 PRKACBP22694 351 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 AGTR1P30556 359 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 VEGFCP49767 419 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 NKX2-5P52952 324 aaPredicted RBP16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 FCN2Q15485 313 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 CDNFQ49AH0 187 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 ZBTB37Q5TC79 503 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 FAAP20Q6NZ36 180 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 TMEM53Q6P2H8 277 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 OR56B1Q8NGI3 324 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 OR2AE1Q8NHA4 323 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 SPSB4Q96A44 273 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 RNF170Q96K19 258 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 BEX2Q9BXY8 128 aa16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 PAIP2BQ9ULR5 123 aaKnown RBP16.42■□□□□ 0.22
SEMA3D-202ENST00000444867 MEIS3P1A6NDR6 274 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 TMEM235A6NFC5 223 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 WIPF3A6NGB9 483 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 C1QBP02746 253 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 CD74P04233 296 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 CD3DP04234 171 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 PMP22Q01453 160 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 FAPQ12884 760 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 ST3GAL2Q16842 350 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 CLVS2Q5SYC1 327 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 TMEM42Q69YG0 159 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 CRIP3Q6Q6R5 217 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 COLCA1Q6ZS62 124 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 ZNF584Q8IVC4 421 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 GMPPAQ96IJ6 420 aaPredicted RBP16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 TECTBQ96PL2 329 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 KCNMB2Q9Y691 235 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 SPTBN4Q9H254 2564 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 DCHS1Q96JQ0 3298 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 hCG_38984A0A1B0GV85 526 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 AQP7O14520 342 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 RAB3DO95716 219 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 ACKR3P25106 362 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 MEF2DQ14814 521 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 OR8B8Q15620 311 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 PNLIPRP3Q17RR3 467 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 FREM1Q5H8C1 2179 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 GLDNQ6ZMI3 551 aaPredicted RBP16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 FJX1Q86VR8 437 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 CPEB3Q8NE35 698 aaKnown RBP16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 STEAP2Q8NFT2 490 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 TNFAIP8L1Q8WVP5 186 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 S100A13Q99584 98 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 GPN1Q9HCN4 374 aaPredicted RBP16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 B3GNT2Q9NY97 397 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 FLVCR2Q9UPI3 526 aa16.41■□□□□ 0.22
SEMA3D-202ENST00000444867 SS18L1O75177 396 aaPredicted RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 CRTAPO75718 401 aaPredicted RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 MPGP29372 298 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 ERP29P30040 261 aaKnown RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 OR3A2P47893 321 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 RPS27AP62979 156 aaKnown RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 MRPS15P82914 257 aaKnown RBP16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 FAM3AP98173 230 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 FBXW9Q5XUX1 488 aa16.4■□□□□ 0.22
SEMA3D-202ENST00000444867 P4HA3Q7Z4N8 544 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms