RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 PNLDC1Q8NA58 520 aaKnown RBP11.06□□□□□ -0.64
EDEM1-202ENST00000434243 CSNK2A3Q8NEV1 391 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 OR1M1Q8NGA1 313 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 OTOSQ8NHW6 89 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
EDEM1-202ENST00000434243 MICU1Q9BPX6 476 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 PPP1R3EQ9H7J1 279 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 RNPEPL1Q9HAU8 725 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 SMURF1Q9HCE7 757 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 ZNF319Q9P2F9 582 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 RHBDD3Q9Y3P4 386 aa11.06□□□□□ -0.64
EDEM1-202ENST00000434243 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 P2RY10O00398 339 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 DVL1O14640 695 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 CDIPTO14735 213 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
EDEM1-202ENST00000434243 TIPRLO75663 272 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 LHBP01229 141 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 ANXA8P13928 327 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 HOXB6P17509 224 aaKnown RBP11.05□□□□□ -0.64
EDEM1-202ENST00000434243 ARF6P62330 175 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 IL5RAQ01344 420 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 SNCBQ16143 134 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 DNAL1Q4LDG9 190 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 TMEM236Q5W0B7 351 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 BTN2A1Q7KYR7 527 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 RHOUQ7L0Q8 258 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 PRSS45Q7RTY3 260 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 WDR86Q86TI4 376 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 PIGCQ92535 297 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 WDFY2Q96P53 400 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 CCL13Q99616 98 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 RGCCQ9H4X1 137 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 UNKLQ9H9P5 680 aaKnown RBP11.05□□□□□ -0.64
EDEM1-202ENST00000434243 TVP23BQ9NYZ1 205 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 LAMP5Q9UJQ1 280 aa11.05□□□□□ -0.64
EDEM1-202ENST00000434243 ZNF850A8MQ14 1090 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 CLDN34H7C241 214 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 PRODHO43272 600 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 FKBP6O75344 327 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 CRYBA1P05813 215 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 OMGP23515 440 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 HCCSP53701 268 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 BPIFB3P59826 476 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
EDEM1-202ENST00000434243 IL13RA1P78552 427 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 CDK5Q00535 292 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 PRDX4Q13162 271 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 APOFQ13790 326 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 SNAPC1Q16533 368 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 SLC36A1Q7Z2H8 476 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 KRT77Q7Z794 578 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 BBS1Q8NFJ9 593 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 FAM81AQ8TBF8 368 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 BCAS4Q8TDM0 211 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 GATAD2BQ8WXI9 593 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 LHX4Q969G2 390 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 SEH1LQ96EE3 360 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 HIST1H2AAQ96QV6 131 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 RTL8AQ9BWD3 113 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 DNAJB9Q9UBS3 223 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
EDEM1-202ENST00000434243 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 PSMD9O00233 223 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 ECDO95905 644 aaPredicted RBP11.03□□□□□ -0.64
EDEM1-202ENST00000434243 MRPL3P09001 348 aaKnown RBP11.03□□□□□ -0.64
EDEM1-202ENST00000434243 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
EDEM1-202ENST00000434243 IKZF1Q13422 519 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 PDCD1Q15116 288 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 WDR38Q5JTN6 314 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 COMMD2Q86X83 199 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 PDZD9Q8IXQ8 264 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 FGFRL1Q8N441 504 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 GALNT4Q8N4A0 578 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 SCCPDHQ8NBX0 429 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 OR5T2Q8NGG2 359 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 RPL3LQ92901 407 aaKnown RBP11.03□□□□□ -0.64
EDEM1-202ENST00000434243 RNF170Q96K19 258 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 TBX15Q96SF7 602 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 NIPAL2Q9H841 368 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 SNTG1Q9NSN8 517 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 ONECUT1Q9UBC0 465 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 LRP12Q9Y561 859 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 MPC1Q9Y5U8 109 aa11.03□□□□□ -0.64
EDEM1-202ENST00000434243 A0A1B0GW55 424 aa11.02□□□□□ -0.65
EDEM1-202ENST00000434243 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
EDEM1-202ENST00000434243 DYNC1I1O14576 645 aa11.02□□□□□ -0.65
EDEM1-202ENST00000434243 NDUFB3O43676 98 aa11.02□□□□□ -0.65
EDEM1-202ENST00000434243 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
EDEM1-202ENST00000434243 DUX4L2P0CJ85 424 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms