RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RBMY1A1P0DJD3 496 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ICAM2P13598 275 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 GFAPP14136 432 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CSKP41240 450 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 GPR6P46095 362 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 NPBWR2P48146 333 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CSNK1DP48730 415 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRPL19P49406 292 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMED10P49755 219 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SUB1P53999 127 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 APOC4P55056 127 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RPL26P61254 145 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 PSME3P61289 254 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RHOAP61586 193 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 AP1S1P61966 158 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ADARB1P78563 741 aaKnown RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC7A9P82251 487 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF763Q0D2J5 394 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 FLOT2Q14254 428 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ALKBH6Q3KRA9 238 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CASC10Q5T4H9 136 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 OGFRL1Q5TC84 451 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 C1orf94Q6P1W5 598 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZFP1Q6P2D0 407 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 IZUMO2Q6UXV1 221 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 RNF165Q6ZSG1 346 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 FUNDC1Q8IVP5 155 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 STK40Q8N2I9 435 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 DCAF4L2Q8NA75 395 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 NEIL3Q8TAT5 605 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 EEF1AKMT1Q8WVE0 214 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 C8orf44Q96CB5 159 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 C19orf60Q96EN9 201 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 C16orf74Q96GX8 76 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 GPR21Q99679 349 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SH3GL3Q99963 347 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC7A10Q9NS82 523 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CCDC167Q9P0B6 97 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 CD300AQ9UGN4 299 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 TBX21Q9UL17 535 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 PSMD13Q9UNM6 376 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 NDUFAF1Q9Y375 327 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC25A15Q9Y619 301 aa3.45□□□□□ -1.86
HMGB3P18-201ENST00000406327 PDCD11Q14690 1871 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 A0A0J9YXY3 114 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 A0A0J9YYE9 177 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PRORSD1PA6NEY8 169 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 BBIP1A8MTZ0 92 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 E5RI56 91 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PRMT5O14744 637 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRASO14807 208 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 DENRO43583 198 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 NIPSNAP2O75323 286 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 EIF3GO75821 320 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TIMP1P01033 207 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRBC1P01850 177 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 RPS17P08708 135 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 LINC00032P0C843 101 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 IDO1P14902 403 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF7P17097 686 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 RPS3P23396 243 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 STOMP27105 288 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 GABRR2P28476 465 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 UQCRFS1P47985 274 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 FOXA1P55317 472 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 DSCR10P59022 87 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 DEFB103AP81534 67 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 LIPEQ05469 1076 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 MAB21L1Q13394 359 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 SF3A2Q15428 464 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TSNQ15631 228 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 NRF1Q16656 503 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 BEX5Q5H9J7 111 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 COQ5Q5HYK3 327 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 LPCAT4Q643R3 524 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PTRHD1Q6GMV3 140 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 REEP3Q6NUK4 255 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF836Q6ZNA1 936 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF620Q6ZNG0 422 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 LHFPL3Q86UP9 236 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 CPNE9Q8IYJ1 553 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PRR22Q8IZ63 422 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR56A4Q8NGH8 313 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 FANK1Q8TC84 345 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 WFDC5Q8TCV5 224 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 CD200R1Q8TD46 325 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 DDI1Q8WTU0 396 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TWIST2Q8WVJ9 160 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ISG20Q96AZ6 181 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ANKRD9Q96BM1 317 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 SGK3Q96BR1 496 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ROPN1LQ96C74 230 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ASB9Q96DX5 294 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 DUS3LQ96G46 650 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 FCRL1Q96LA6 429 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF382Q96SR6 550 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 HOPXQ9BPY8 73 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 NRIP2Q9BQI9 281 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 VCXQ9H320 206 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms