RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PRR19A6NJB7 356 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 SULT1C2O00338 296 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 SLC33A1O00400 549 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 ZP4Q12836 540 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 GGTLC2Q14390 218 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR51A4Q8NGJ6 313 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 FAM76BQ5HYJ3 339 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 C17orf82Q86X59 251 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF709Q8N972 641 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 SPSB1Q96BD6 273 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 POLDIP2Q9Y2S7 368 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 KLF4O43474 513 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ACP1P24666 158 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 EGR4Q05215 589 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 C1QTNF12Q5T7M4 302 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ARHGEF39Q8N4T4 335 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 RNF133Q8WVZ7 376 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 NECAP2Q9NVZ3 263 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 B3GNT2Q9NY97 397 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 IL17BQ9UHF5 180 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 NBASA2RRP1 2371 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 DNPH1O43598 174 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 SP1P08047 785 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 GSTP1P09211 210 aaKnown RBP12.86□□□□□ -0.35
TCOF1-202ENST00000377797 RAD52P43351 418 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 UQCC2Q9BRT2 126 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF436Q9C0F3 470 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-202ENST00000377797 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF17P17021 662 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 HRH1P35367 487 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 RFX2P48378 723 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 FUT6P51993 359 aa12.86□□□□□ -0.35
TCOF1-202ENST00000377797 ELP2Q6IA86 826 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 LIN37Q96GY3 246 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-202ENST00000377797 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF732B4DXR9 585 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 ADAM11O75078 769 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 GLI4P10075 376 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 CCL2P13500 99 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
TCOF1-202ENST00000377797 FBXW12Q6X9E4 464 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 OR56B2PQ8NGI1 322 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 OR1J1Q8NGS3 322 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 SELEP16581 610 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 NFYAP23511 347 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-202ENST00000377797 MMP16P51512 607 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 CD300LBA8K4G0 201 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 NAT1P18440 290 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 PI3P19957 117 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF718Q3SXZ3 478 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 LINC00303Q3SY05 128 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 CATSPERDQ86XM0 798 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 CMBLQ96DG6 245 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 DDOQ99489 341 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 PTDSS2Q9BVG9 487 aa12.85□□□□□ -0.35
TCOF1-202ENST00000377797 KIR2DS1A0A191URI9 304 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 EFSO43281 561 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 CTAG2O75638 210 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 ACTL6AO96019 429 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 KIR2DS4P43632 304 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 KIR2DS1Q14954 304 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 LSRQ86X29 649 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-202ENST00000377797 ASB5Q8WWX0 329 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 MDC1Q14676 2089 aaKnown RBP12.84□□□□□ -0.35
TCOF1-202ENST00000377797 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 H3BMH7 237 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 LYZL6O75951 148 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 EDDM3AQ14507 147 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 LPCAT3Q6P1A2 487 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 PPP1R32Q7Z5V6 425 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 AMELYQ99218 206 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 SLC17A5Q9NRA2 495 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 M0R036 132 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 NKX2-8O15522 239 aa12.84□□□□□ -0.35
TCOF1-202ENST00000377797 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms