RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 RNF128Q8TEB7 428 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FGF14Q92915 247 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 S100PBPQ96BU1 408 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FOXRED1Q96CU9 486 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 KLHDC3Q9BQ90 382 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FREM3P0C091 2139 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TOX3O15405 576 aaPredicted RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TXNDC12O95881 172 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 THEGLP0DJG4 465 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 CDKN2AP42771 156 aaKnown RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 NPY4RP50391 375 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ASCL1P50553 236 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FAM53BQ14153 422 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 EBPQ15125 230 aaKnown RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 METRNLQ641Q3 311 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ABLIM2Q6H8Q1 611 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ZNF585AQ6P3V2 769 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 Q6ZRG5 221 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 LYPD6Q86Y78 171 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ST7LQ8TDW4 575 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 THOC3Q96J01 351 aaKnown RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 SLC41A2Q96JW4 573 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TWSG1Q9GZX9 223 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ETV7Q9Y603 341 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 A0A1B0GW55 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 LDLRAD4O15165 306 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 PNPP00491 289 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 IGHV3-9P01782 118 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TRGC2P03986 189 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L2P0CJ85 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L3P0CJ86 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L4P0CJ87 422 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L5P0CJ88 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L6P0CJ89 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4L7P0CJ90 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FABP4P15090 132 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 PRSS3P35030 304 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DIO1P49895 249 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 MRPS11P82912 194 aaKnown RBP7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 PRSS8Q16651 343 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 Q499Y3 187 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 GLYATL3Q5SZD4 288 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 BRICD5Q6PL45 260 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 KLHL24Q6TFL4 600 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 KIRREL2Q6UWL6 708 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ZNF227Q86WZ6 799 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TMEM52Q8NDY8 209 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 FRZBQ92765 325 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 ERGIC1Q969X5 290 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 HIST1H2BLQ99880 126 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 EPHX3Q9H6B9 360 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DUX4Q9UBX2 424 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 DHDHQ9UQ10 334 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
SMARCA1-203ENST00000371123 TMEM150CB9EJG8 249 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 NME2P1O60361 137 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 CLEC3AO75596 197 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 WISP1O95388 367 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 HEXBP07686 556 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 HKR1P10072 659 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 RPS4Y1P22090 263 aaKnown RBP7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 OMGP23515 440 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 IGFALSP35858 605 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 PLA2G5P39877 138 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 RAB5CP51148 216 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 TRA2AQ13595 282 aaKnown RBP eCLIP7.78□□□□□ -1.164e-6■■■□□ 15.9
SMARCA1-203ENST00000371123 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 ZNF619Q8N2I2 560 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 OR13H1Q8NG92 308 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SPPL3Q8TCT6 385 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SLC2A12Q8TD20 617 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 TSLPQ969D9 159 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 MED29Q9NX70 200 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SLCO1B1Q9Y6L6 691 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 LOC101059948A0A1B0GTJ6 334 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 H0YIG0 161 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 P2RY10O00398 339 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 HCRTR1O43613 425 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 KLK2P20151 261 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 RAB6AP20340 208 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 MDKP21741 143 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 CFPP27918 469 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 TACR3P29371 465 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 RAB32Q13637 225 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 MED25Q71SY5 747 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 OR13C3Q8NGS6 347 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SAT2Q96F10 170 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 ZNF700Q9H0M5 742 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 ZBP1Q9H171 429 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SH3BGRL3Q9H299 93 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 R4GN57 208 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 ZNF217O75362 1048 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 HSD11B1P28845 292 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SSPNQ14714 243 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 MIDNQ504T8 468 aa7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 SP5Q6BEB4 398 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-203ENST00000371123 VASH2Q86V25 355 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms