RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 GPR173Q9NS66 373 aa16.02■□□□□ 0.16
CLN3-206ENST00000360019 COQ3Q9NZJ6 369 aa16.02■□□□□ 0.16
CLN3-206ENST00000360019 CRIM1Q9NZV1 1036 aa16.02■□□□□ 0.16
CLN3-206ENST00000360019 OR5V1Q9UGF6 321 aa16.02■□□□□ 0.16
CLN3-206ENST00000360019 SPATA2Q9UM82 520 aa16.02■□□□□ 0.16
CLN3-206ENST00000360019 CADP27708 2225 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 M0R1B8 84 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 GMDSO60547 372 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ALX3O95076 343 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ELK1P19419 428 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 PPP1CBP62140 327 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 NAAAQ02083 359 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ZNF846Q147U1 533 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 P2RY14Q15391 338 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 CDSNQ15517 529 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 IGFBP7Q16270 282 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 C1orf100Q5SVJ3 147 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 GALNT11Q8NCW6 608 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 OR4D6Q8NGJ1 314 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 UBASH3BQ8TF42 649 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 OR2J1Q9GZK6 312 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 WDR12Q9GZL7 423 aaKnown RBP16.01■□□□□ 0.15
CLN3-206ENST00000360019 OR10A4Q9H209 315 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 V9GYH0 126 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ZNF816-ZNF321PA0A0X1KG74 233 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 FAM90A27PA6NNH2 459 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ALDOBP05062 364 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 EIF4EP06730 217 aaKnown RBP16.01■□□□□ 0.15
CLN3-206ENST00000360019 ERCC1P07992 297 aaPredicted RBP16.01■□□□□ 0.15
CLN3-206ENST00000360019 CALCBP10092 127 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 PRF1P14222 555 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 GNLYP22749 145 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 HTR2CP28335 458 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 RAB11BQ15907 218 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 CLVS2Q5SYC1 327 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ZBTB37Q5TC79 503 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 CRIP3Q6Q6R5 217 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 OR6M1Q8NGM8 313 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 OR1J1Q8NGS3 322 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 PRR7Q8TB68 274 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 NPRL2Q8WTW4 380 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 ZFAND2BQ8WV99 257 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 FOXRED1Q96CU9 486 aaPredicted RBP16.01■□□□□ 0.15
CLN3-206ENST00000360019 CNTD2Q9H8S5 307 aa16.01■□□□□ 0.15
CLN3-206ENST00000360019 THBDP07204 575 aa16■□□□□ 0.15
CLN3-206ENST00000360019 AZGP1P25311 298 aaKnown RBP16■□□□□ 0.15
CLN3-206ENST00000360019 ZNF93P35789 620 aaPredicted RBP16■□□□□ 0.15
CLN3-206ENST00000360019 FBXL19-AS1Q494R0 122 aa16■□□□□ 0.15
CLN3-206ENST00000360019 SPANXN2Q5MJ10 180 aa16■□□□□ 0.15
CLN3-206ENST00000360019 CNIH2Q6PI25 160 aa16■□□□□ 0.15
CLN3-206ENST00000360019 FBXW12Q6X9E4 464 aa16■□□□□ 0.15
CLN3-206ENST00000360019 OR51D1Q8NGF3 324 aa16■□□□□ 0.15
CLN3-206ENST00000360019 LILRB4Q8NHJ6 448 aa16■□□□□ 0.15
CLN3-206ENST00000360019 SLC25A40Q8TBP6 338 aa16■□□□□ 0.15
CLN3-206ENST00000360019 DIRAS2Q96HU8 199 aa16■□□□□ 0.15
CLN3-206ENST00000360019 MRI1Q9BV20 369 aa16■□□□□ 0.15
CLN3-206ENST00000360019 A0A1B0GUH1 482 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 NKX2-6A6NCS4 301 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 GGT3PA6NGU5 568 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 CD300LBA8K4G0 201 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 HCKP08631 526 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 EVX1P49640 407 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 ZNF45Q02386 682 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 PLA2G7Q13093 441 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 KRT74Q7RTS7 529 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 LRRC28Q86X40 367 aaPredicted RBP15.99■□□□□ 0.15
CLN3-206ENST00000360019 PIGTQ969N2 578 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 FAM3DQ96BQ1 224 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 SORCS2Q96PQ0 1159 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 UQCC2Q9BRT2 126 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 KCNK15Q9H427 330 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 KCNN3Q9UGI6 736 aa15.99■□□□□ 0.15
CLN3-206ENST00000360019 ERRFI1Q9UJM3 462 aaPredicted RBP15.99■□□□□ 0.15
CLN3-206ENST00000360019 HEATR1Q9H583 2144 aaKnown RBP15.99■□□□□ 0.15
CLN3-206ENST00000360019 MAGEB3O15480 346 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 LILRA1O75019 489 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 NRASP01111 189 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 OCMP0CE72 109 aaPredicted RBP15.98■□□□□ 0.15
CLN3-206ENST00000360019 RAD52P43351 418 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 MADCAM1Q13477 382 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 OR2T2Q6IF00 324 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 BHLHE23Q8NDY6 225 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 PIGCQ92535 297 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 CMBLQ96DG6 245 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 SLC25A38Q96DW6 304 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 ZC3HAV1LQ96H79 300 aaKnown RBP15.98■□□□□ 0.15
CLN3-206ENST00000360019 ZNF850A8MQ14 1090 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 POU3F4P49335 361 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 SCAND1P57086 179 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 KISS1Q15726 138 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 C2orf76Q3KRA6 126 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 TMEM255AQ5JRV8 349 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 CDH26Q8IXH8 852 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 CSNK2A3Q8NEV1 391 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 SPSB1Q96BD6 273 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 MARS2Q96GW9 593 aaKnown RBP15.98■□□□□ 0.15
CLN3-206ENST00000360019 CYSLTR2Q9NS75 346 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 GPR160Q9UJ42 338 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 ADAM30Q9UKF2 790 aa15.98■□□□□ 0.15
CLN3-206ENST00000360019 ETV7Q9Y603 341 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms