RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
DDX55-202ENST00000354291 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 CDH10Q9Y6N8 788 aa12.95□□□□□ -0.34
DDX55-202ENST00000354291 B2RBV5 119 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 SAA4P35542 130 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 TPTEP56180 551 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 TRAP1Q12931 704 aaKnown RBP12.94□□□□□ -0.34
DDX55-202ENST00000354291 RASSF6Q6ZTQ3 369 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 FGFRL1Q8N441 504 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 NKX3-1Q99801 234 aaPredicted RBP12.94□□□□□ -0.34
DDX55-202ENST00000354291 MUC13Q9H3R2 512 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 FN3KQ9H479 309 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 FN3KRPQ9HA64 309 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 MAB21L2Q9Y586 359 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 PCDHGB5Q9Y5G0 923 aa12.94□□□□□ -0.34
DDX55-202ENST00000354291 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 OOEPA6NGQ2 149 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 BHLHE40O14503 412 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 CCNB2O95067 398 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 GASTP01350 101 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 LCATP04180 440 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 CD200P41217 278 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 MAGEA2P43356 314 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 RAD23AP54725 363 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 GK2Q14410 553 aaPredicted RBP12.93□□□□□ -0.34
DDX55-202ENST00000354291 METAP1DQ6UB28 335 aaPredicted RBP12.93□□□□□ -0.34
DDX55-202ENST00000354291 PGAP1Q75T13 922 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 PROKR2Q8NFJ6 384 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 OR9Q2Q8NGE9 314 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 RORBQ92753 470 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 SPTSSAQ969W0 71 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 NSL1Q96IY1 281 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 DDOQ99489 341 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 BTBD10Q9BSF8 475 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 FAM234AQ9H0X4 552 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 MAGIXQ9H6Y5 334 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 PNRC2Q9NPJ4 139 aaKnown RBP12.93□□□□□ -0.34
DDX55-202ENST00000354291 TRIM36Q9NQ86 728 aa12.93□□□□□ -0.34
DDX55-202ENST00000354291 MRPL22Q9NWU5 206 aaKnown RBP12.93□□□□□ -0.34
DDX55-202ENST00000354291 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 ATP6V1B2P21281 511 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 ZNF770Q6IQ21 691 aaPredicted RBP12.92□□□□□ -0.34
DDX55-202ENST00000354291 NAA40Q86UY6 237 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 DHFR2Q86XF0 187 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 LNX2Q8N448 690 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 CYB561A3Q8NBI2 242 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 OR4C15Q8NGM1 316 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 SLCO4A1Q96BD0 722 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 RANBP3Q9H6Z4 567 aaPredicted RBP12.92□□□□□ -0.34
DDX55-202ENST00000354291 BAIAP2Q9UQB8 552 aa12.92□□□□□ -0.34
DDX55-202ENST00000354291 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
DDX55-202ENST00000354291 IGHV3OR15-7A0A075B7D8 119 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 A0A1W2PRX2 142 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 C3orf84H3BNL1 204 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 M0R135 149 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 PYCR1P32322 319 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
DDX55-202ENST00000354291 HABP2Q14520 560 aaPredicted RBP12.91□□□□□ -0.34
DDX55-202ENST00000354291 OR8G1Q15617 311 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 MICAQ29983 383 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 FAM98BQ52LJ0 330 aaKnown RBP12.91□□□□□ -0.34
DDX55-202ENST00000354291 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
DDX55-202ENST00000354291 FAM90A1Q86YD7 464 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 OR51G2Q8NGK0 314 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 C17orf50Q8WW18 174 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 SPRYD4Q8WW59 207 aaPredicted RBP12.91□□□□□ -0.34
DDX55-202ENST00000354291 ZNF799Q96GE5 643 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 TSSK6Q9BXA6 273 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 KRTAP17-1Q9BYP8 105 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 REEP1Q9H902 201 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 RAB18Q9NP72 206 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 TBC1D23Q9NUY8 699 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 C1orf123Q9NWV4 160 aa12.91□□□□□ -0.34
DDX55-202ENST00000354291 TCRBV5S2A0A599 114 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 TVP23AA6NH52 213 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 E9PQ18 207 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 CALB2P22676 271 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 CA6P23280 308 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 FMO3P31513 532 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OTX1P32242 354 aaPredicted RBP12.9□□□□□ -0.34
DDX55-202ENST00000354291 BLVRAP53004 296 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 DOC2BQ14184 412 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OR2T5Q6IEZ7 315 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 LCN8Q6JVE9 175 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 DRAM2Q6UX65 266 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 ZNF826PQ6ZT77 177 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms