RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF708P17019 499 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 S100A1P23297 94 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 MPZP25189 248 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 RFC3P40938 356 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 KISS1Q15726 138 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 HYAL4Q2M3T9 481 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 SLC16A14Q7RTX9 510 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 BPIFB2Q8N4F0 458 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 MDS2Q8NDY4 140 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 OR56B1Q8NGI3 324 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM59Q9BXS4 323 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 MYOZ1Q9NP98 299 aaPredicted RBP14.61□□□□□ -0.07
SAMM50-201ENST00000350028 PIGLQ9Y2B2 252 aa14.61□□□□□ -0.07
SAMM50-201ENST00000350028 GVINP1Q7Z2Y8 2422 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 NME2P1O60361 137 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 MRPL33O75394 65 aaKnown RBP14.6□□□□□ -0.07
SAMM50-201ENST00000350028 FARS2O95363 451 aaKnown RBP14.6□□□□□ -0.07
SAMM50-201ENST00000350028 NAT2P11245 290 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 FAHP16930 419 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 NME2P22392 152 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 PTGFRP43088 359 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 MAGEA5P43359 124 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 SNRPD2P62316 118 aaKnown RBP14.6□□□□□ -0.07
SAMM50-201ENST00000350028 SRYQ05066 204 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 ZMYND11Q15326 602 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 UBE2V2Q15819 145 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 PNLIPRP3Q17RR3 467 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 RNASE10Q5GAN6 216 aaKnown RBP14.6□□□□□ -0.07
SAMM50-201ENST00000350028 IDO2Q6ZQW0 420 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM104Q8NE00 496 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 OR11H4Q8NGC9 324 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 OR2T35Q8NGX2 323 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 RADILQ96JH8 1075 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 GPR137Q96N19 417 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 OR2H1Q9GZK4 316 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 CST11Q9H112 138 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 SLC6A15Q9H2J7 730 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 RNF122Q9H9V4 155 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 SLC2A8Q9NY64 477 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF391Q9UJN7 358 aa14.6□□□□□ -0.07
SAMM50-201ENST00000350028 OR6C65A6NJZ3 312 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 OR2A4O95047 310 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 GNB3P16520 340 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 TBPP20226 339 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 HTR5AP47898 357 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 MEOX1P50221 254 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 RAP2BP61225 183 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 PSG4Q00888 419 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 SNAI3Q3KNW1 292 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF767PQ75MW2 155 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 GALNTL5Q7Z4T8 443 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 RAB3CQ96E17 227 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 OR2A7Q96R45 310 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 PRRT1Q99946 306 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 NICN1Q9BSH3 213 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 WNT5BQ9H1J7 359 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 IFT46Q9NQC8 304 aa14.59□□□□□ -0.07
SAMM50-201ENST00000350028 MCTS1Q9ULC4 181 aaKnown RBP14.59□□□□□ -0.07
SAMM50-201ENST00000350028 A0A0A6YYD4 124 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM82A0PJX8 343 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 LRP3O75074 770 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 CRTAPO75718 401 aaPredicted RBP14.58□□□□□ -0.07
SAMM50-201ENST00000350028 SNAPC5O75971 98 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 LCATP04180 440 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 CD46P15529 392 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF24P17028 368 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 GNG2P59768 71 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 TSPO2Q5TGU0 170 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 ASCL5Q7RTU5 278 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 DTX1Q86Y01 620 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 SKA3Q8IX90 412 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 FAM109AQ8N4B1 249 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 FAM89BQ8N5H3 189 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 OR52B4Q8NGK2 314 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 AKR7LQ8NHP1 331 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 NUDCD2Q8WVJ2 157 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 HAS2Q92819 552 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 REEP6Q96HR9 211 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 SLC6A7Q99884 636 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 BANF2Q9H503 90 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 PIPOXQ9P0Z9 390 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 PLEKHA6Q9Y2H5 1048 aa14.58□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF724A8MTY0 619 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 PROB1E7EW31 1015 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 FCGR2AP12318 317 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 HIST1H1DP16402 221 aaKnown RBP14.58□□□□□ -0.08
SAMM50-201ENST00000350028 SOX8P57073 446 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 PPIAP62937 165 aaKnown RBP14.58□□□□□ -0.08
SAMM50-201ENST00000350028 RPS27AP62979 156 aaKnown RBP14.58□□□□□ -0.08
SAMM50-201ENST00000350028 RIPPLY1Q0D2K3 151 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 SFRP5Q5T4F7 317 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 CRIP3Q6Q6R5 217 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 STEAP2Q8NFT2 490 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 OR4S1Q8NGB4 309 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 LILRB4Q8NHJ6 448 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 SPSB1Q96BD6 273 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 S100A13Q99584 98 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 RGCCQ9H4X1 137 aa14.58□□□□□ -0.08
SAMM50-201ENST00000350028 ACKR4Q9NPB9 350 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms