RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 C1orf147Q96MC9 270 aaPredicted RBP18.33■□□□□ 0.53
VRK2-201ENST00000340157 THAP7Q9BT49 309 aaPredicted RBP18.33■□□□□ 0.53
VRK2-201ENST00000340157 ZNF835Q9Y2P0 537 aa18.33■□□□□ 0.53
VRK2-201ENST00000340157 EEF1E1O43324 174 aaKnown RBP18.33■□□□□ 0.52
VRK2-201ENST00000340157 PTHLHP12272 177 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 APLNRP35414 380 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 MAP2K3P46734 347 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 OR3A4PP47883 348 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 UBE2NP61088 152 aaKnown RBP18.33■□□□□ 0.52
VRK2-201ENST00000340157 UNC119Q13432 240 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 GFRALQ6UXV0 394 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 CDH26Q8IXH8 852 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 CCDC36Q8IYA8 594 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 SLC30A7Q8NEW0 376 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 YIPF5Q969M3 257 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 REPIN1Q9BWE0 567 aaKnown RBP18.33■□□□□ 0.52
VRK2-201ENST00000340157 GPR173Q9NS66 373 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 STARD10Q9Y365 291 aa18.33■□□□□ 0.52
VRK2-201ENST00000340157 CTDSPLO15194 276 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 HOXD4P09016 255 aaPredicted RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 MNDAP41218 407 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 TAS2R20P59543 309 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 GK2Q14410 553 aaPredicted RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 EIF2S3LQ2VIR3 472 aaKnown RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 RNASE12Q5GAN4 147 aaKnown RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 TMEM69Q5SWH9 247 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 MTFR2Q6P444 385 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 ZNF474Q6S9Z5 364 aaPredicted RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 ANGPTL5Q86XS5 388 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 RFT1Q96AA3 541 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 C11orf54Q9H0W9 315 aaPredicted RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 TP63Q9H3D4 680 aaPredicted RBP18.32■□□□□ 0.52
VRK2-201ENST00000340157 AUNIPQ9H7T9 357 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 TINAGQ9UJW2 476 aa18.32■□□□□ 0.52
VRK2-201ENST00000340157 GMDSO60547 372 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 CD3GP09693 182 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 PITPNAQ00169 270 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 HLXQ14774 488 aaPredicted RBP18.31■□□□□ 0.52
VRK2-201ENST00000340157 RFPL4BQ6ZWI9 263 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 NRARPQ7Z6K4 114 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 UBASH3BQ8TF42 649 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 PIGTQ969N2 578 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 PRRG2O14669 202 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 XRCC3O43542 346 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 GSTZ1O43708 216 aaPredicted RBP18.31■□□□□ 0.52
VRK2-201ENST00000340157 BPNT1O95861 308 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 VSIG8P0DPA2 414 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 HOXB1P14653 301 aaPredicted RBP18.31■□□□□ 0.52
VRK2-201ENST00000340157 IDH3GP51553 393 aaPredicted RBP18.31■□□□□ 0.52
VRK2-201ENST00000340157 P2RY6Q15077 328 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 KISS1Q15726 138 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 AWAT2Q6E213 333 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 SMIM4Q8WVI0 70 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 NEDD4LQ96PU5 975 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 CRIM1Q9NZV1 1036 aa18.31■□□□□ 0.52
VRK2-201ENST00000340157 MRPS28Q9Y2Q9 187 aaKnown RBP18.31■□□□□ 0.52
VRK2-201ENST00000340157 ATRXP46100 2492 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 GGT3PA6NGU5 568 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 C19orf18Q8NEA5 215 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 PTX4Q96A99 478 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 SFXN3Q9BWM7 321 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 FAIMQ9NVQ4 179 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 PTTG3PQ9NZH4 202 aa18.3■□□□□ 0.52
VRK2-201ENST00000340157 AGFG2O95081 481 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 GLIPR1L1Q6UWM5 242 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 BEND4Q6ZU67 534 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 C1QL2Q7Z5L3 287 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 GAL3ST1Q99999 423 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 ATG5Q9H1Y0 275 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 RABL2AQ9UBK7 228 aaPredicted RBP18.29■□□□□ 0.52
VRK2-201ENST00000340157 RABL2BQ9UNT1 228 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 ITPR1Q14643 2758 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 MED19A0JLT2 244 aaPredicted RBP18.29■□□□□ 0.52
VRK2-201ENST00000340157 TMEM14DPA8MWL7 114 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 IGKV3-15P01624 115 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 RAB6AP20340 208 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 PMPCAQ10713 525 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 MOGAT2Q3SYC2 334 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 CLVS2Q5SYC1 327 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 CCBE1Q6UXH8 406 aaPredicted RBP18.29■□□□□ 0.52
VRK2-201ENST00000340157 NCCRP1Q6ZVX7 275 aaPredicted RBP18.29■□□□□ 0.52
VRK2-201ENST00000340157 OR56B2PQ8NGI1 322 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 OR5D18Q8NGL1 313 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 C1QTNF6Q9BXI9 259 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 OR51B6Q9H340 312 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 FBLN5Q9UBX5 448 aa18.29■□□□□ 0.52
VRK2-201ENST00000340157 IGKV1-27A0A075B6S5 117 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 CBR1P16152 277 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 SRP9P49458 86 aaKnown RBP18.28■□□□□ 0.52
VRK2-201ENST00000340157 TBC1D28Q2M2D7 210 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 BHLHA15Q7RTS1 189 aaPredicted RBP18.28■□□□□ 0.52
VRK2-201ENST00000340157 C17orf78Q8N4C9 275 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 TMEM104Q8NE00 496 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 OR52I2Q8NH67 350 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 FAM46BQ96A09 425 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 GPER1Q99527 375 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 PRORYQ9H606 182 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 TBCCD1Q9NVR7 557 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 SHANK1Q9Y566 2161 aa18.28■□□□□ 0.52
VRK2-201ENST00000340157 NBEAQ8NFP9 2946 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms