RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TMEM268Q5VZI3 342 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 ZNF574Q6ZN55 896 aaPredicted RBP6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 FAM26EQ8N5C1 309 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 TEX29Q8N6K0 151 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 ZNF439Q8NDP4 499 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 PP6455Q8WZ26 134 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 RPL3LQ92901 407 aaKnown RBP6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 ACY3Q96HD9 319 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 FCRL1Q96LA6 429 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 PLA2G12AQ9BZM1 189 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 UCK1Q9HA47 277 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 KCNE3Q9Y6H6 103 aa6.2□□□□□ -1.42
GAPVD1-202ENST00000297933 B4E171 279 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CLEC2LP0C7M8 214 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 HOXB3P14651 431 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TSPAN7P41732 249 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 RAB7AP51149 207 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 KRTCAP3Q53RY4 240 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CCDC71Q8IV32 467 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 WDR31Q8NA23 367 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 OR2M7Q8NG81 312 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 OR2G3Q8NGZ4 309 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MITD1Q8WV92 249 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ZFAND2BQ8WV99 257 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CLDN23Q96B33 292 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ALG14Q96F25 216 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 RASL10BQ96S79 203 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 SAP30LQ9HAJ7 183 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 FAM60AQ9NP50 221 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 BIN3Q9NQY0 253 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CHST2Q9Y4C5 530 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MAGEB4O15481 346 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 OR7C2O60412 319 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 SP1P08047 785 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ASCL1P50553 236 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TOMM34Q15785 309 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CTU2Q2VPK5 515 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ARHGEF39Q8N4T4 335 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 OR13C8Q8NGS7 320 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MZB1Q8WU39 189 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ARHGDIGQ99819 225 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 NDUFB11Q9NX14 153 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 SLC25A37Q9NYZ2 338 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TREM2Q9NZC2 230 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 A0A1B0GTH9 108 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 H0Y8G0 127 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 SNAPINO95295 136 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 EML2O95834 649 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 GLI4P10075 376 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ZBTB25P24278 435 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CCR6P51684 374 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 C2orf76Q3KRA6 126 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 DMRTC1Q5HYR2 192 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TUSC5Q8IXB3 177 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 EXTL1Q92935 676 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 DOK1Q99704 481 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 RASL11BQ9BPW5 248 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MS4A7Q9GZW8 240 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 PSENENQ9NZ42 101 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 LRP12Q9Y561 859 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CEPT1Q9Y6K0 416 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MN1Q10571 1320 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 IGLV3-16A0A075B6K0 115 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 C20orf202A1L168 122 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 LRRC3CA6NJW4 275 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 DEFB108AA8MXU0 73 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TCRBP04435 133 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 LSAMPQ13449 338 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 IGFBP7Q16270 282 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TMPRSS11FQ6ZWK6 438 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ASCL5Q7RTU5 278 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TIPARPQ7Z3E1 657 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ERGIC1Q969X5 290 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 SPSB1Q96BD6 273 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 BTF3L4Q96K17 158 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 C20orf24Q9BUV8 137 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 NTMQ9P121 344 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 C7orf72A4D263 438 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 HRASP01112 189 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MDH2P40926 338 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 CCR9P51686 369 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 STARD6P59095 220 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 RAC3P60763 192 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ACSM6Q6P461 480 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 OR10R2Q8NGX6 335 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 GPX8Q8TED1 209 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 WDR54Q9H977 334 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 LPAR2Q9HBW0 351 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 MMP25Q9NPA2 562 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 FBXO8Q9NRD0 319 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 ERRFI1Q9UJM3 462 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 PCYT1BQ9Y5K3 369 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-202ENST00000297933 TMEM235A6NFC5 223 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 TMPRSS2O15393 492 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 SLC25A6P12236 298 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 CEACAM6P40199 344 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 LGALS7P47929 136 aa6.18□□□□□ -1.42
GAPVD1-202ENST00000297933 PCBP3P57721 371 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms