RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RDH10Q8IZV5 341 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 SPERTQ8NA61 448 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 OR10AC1Q8NH08 325 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 UBASH3BQ8TF42 649 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 GHSRQ92847 366 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 GSX2Q9BZM3 304 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 ABCB9Q9NP78 766 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 DYNLRB1Q9NP97 96 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 ENPP5Q9UJA9 477 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 MPC1Q9Y5U8 109 aa12.01□□□□□ -0.49
VPS25-201ENST00000253794 TRBV5-5A0A0J9YX44 114 aa12□□□□□ -0.49
VPS25-201ENST00000253794 ANKRD30BLA7E2S9 258 aa12□□□□□ -0.49
VPS25-201ENST00000253794 MLNRO43193 412 aa12□□□□□ -0.49
VPS25-201ENST00000253794 IGHV1-46P01743 117 aa12□□□□□ -0.49
VPS25-201ENST00000253794 DNASE1P24855 282 aa12□□□□□ -0.49
VPS25-201ENST00000253794 ODF4Q2M2E3 257 aa12□□□□□ -0.49
VPS25-201ENST00000253794 SYT6Q5T7P8 510 aaPredicted RBP12□□□□□ -0.49
VPS25-201ENST00000253794 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
VPS25-201ENST00000253794 MS4A15Q8N5U1 240 aa12□□□□□ -0.49
VPS25-201ENST00000253794 CELF2-AS1Q8N7Q2 184 aa12□□□□□ -0.49
VPS25-201ENST00000253794 BHLHE23Q8NDY6 225 aa12□□□□□ -0.49
VPS25-201ENST00000253794 OR51A4Q8NGJ6 313 aa12□□□□□ -0.49
VPS25-201ENST00000253794 GPR148Q8TDV2 347 aa12□□□□□ -0.49
VPS25-201ENST00000253794 PP6455Q8WZ26 134 aa12□□□□□ -0.49
VPS25-201ENST00000253794 GTF3AQ92664 365 aaKnown RBP12□□□□□ -0.49
VPS25-201ENST00000253794 UFD1Q92890 307 aa12□□□□□ -0.49
VPS25-201ENST00000253794 CHST5Q9GZS9 411 aa12□□□□□ -0.49
VPS25-201ENST00000253794 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
VPS25-201ENST00000253794 MSL2Q9HCI7 577 aa12□□□□□ -0.49
VPS25-201ENST00000253794 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
VPS25-201ENST00000253794 IL19Q9UHD0 177 aa12□□□□□ -0.49
VPS25-201ENST00000253794 PIGLQ9Y2B2 252 aa12□□□□□ -0.49
VPS25-201ENST00000253794 PLEKHA6Q9Y2H5 1048 aa12□□□□□ -0.49
VPS25-201ENST00000253794 RHBDD3Q9Y3P4 386 aa12□□□□□ -0.49
VPS25-201ENST00000253794 CACNA1DQ01668 2161 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 SC5DO75845 299 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 SMIM18P0DKX4 95 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 NAT2P11245 290 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 FAHP16930 419 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
VPS25-201ENST00000253794 CA6P23280 308 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 CDKN1AP38936 164 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 CD200P41217 278 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 MRPS11P82912 194 aaKnown RBP11.99□□□□□ -0.49
VPS25-201ENST00000253794 SLC3A1Q07837 685 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 CLVS2Q5SYC1 327 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 UTS2BQ765I0 119 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 PHC2Q8IXK0 858 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 ZFP41Q8N8Y5 198 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 NEU4Q8WWR8 484 aaPredicted RBP11.99□□□□□ -0.49
VPS25-201ENST00000253794 THRSPQ92748 146 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 MUL1Q969V5 352 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 ITPKCQ96DU7 683 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 SORCS2Q96PQ0 1159 aa11.99□□□□□ -0.49
VPS25-201ENST00000253794 SF3B6Q9Y3B4 125 aaKnown RBP11.99□□□□□ -0.49
VPS25-201ENST00000253794 NOTCH2Q04721 2471 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 ALX3O95076 343 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 ERCC1P07992 297 aaPredicted RBP11.98□□□□□ -0.49
VPS25-201ENST00000253794 PSMA1P25786 263 aaKnown RBP11.98□□□□□ -0.49
VPS25-201ENST00000253794 GNALP38405 381 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 GATA4P43694 442 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 PRDX4Q13162 271 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 TESK1Q15569 626 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 TRAM1Q15629 374 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 DEFB113Q30KQ7 82 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 Q499Y3 187 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 ARMCX4Q5H9R4 360 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 LIPKQ5VXJ0 399 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 OR13C3Q8NGS6 347 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 ADAT3Q96EY9 351 aaPredicted RBP11.98□□□□□ -0.49
VPS25-201ENST00000253794 ELMOD3Q96FG2 381 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 TRMT61AQ96FX7 289 aaKnown RBP11.98□□□□□ -0.49
VPS25-201ENST00000253794 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
VPS25-201ENST00000253794 PLEKHA1Q9HB21 404 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 NDUFB11Q9NX14 153 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 DHDHQ9UQ10 334 aa11.98□□□□□ -0.49
VPS25-201ENST00000253794 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 MAGEA13PA6NCF6 341 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 ANKRD61A6NGH8 418 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 H0YL77 283 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 LMX1BO60663 402 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 GPX5O75715 221 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 NCR1O76036 304 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 INMTO95050 263 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 F12P00748 615 aaPredicted RBP11.97□□□□□ -0.49
VPS25-201ENST00000253794 OCM2P0CE71 109 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 TNFSF4P23510 183 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 GABRA5P31644 462 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 MAGEB1P43366 347 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 PTH2RP49190 550 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 EFNA4P52798 201 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 MAB21L1Q13394 359 aa11.97□□□□□ -0.49
VPS25-201ENST00000253794 SSX1Q16384 188 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms