RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CXADRP78310 365 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 WIPI1Q5MNZ9 446 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 ACER2Q5QJU3 275 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 FOXL2NBQ6ZUU3 175 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 BEST3Q8N1M1 668 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 FXYD6-FXYD2A0A087WZ82 144 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 MCRIP1C9JLW8 97 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 TRAPPC6AO75865 159 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 FAHP16930 419 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 SRD5A2P31213 254 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 ZNF133P52736 654 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 CRIP3Q6Q6R5 217 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 C1QL2Q7Z5L3 287 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 C20orf196Q8IYI0 205 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 FXYD6Q9H0Q3 95 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 ALX4Q9H161 411 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 IFT46Q9NQC8 304 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 PLEK2Q9NYT0 353 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 NCKAP5O14513 1909 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 RPS10-NUDT3A0A1W2PQS6 291 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CXCL13O43927 109 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CRTAPO75718 401 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 RGS11O94810 467 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SERPINA7P05543 415 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CTSSP25774 331 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CD96P40200 585 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CASRP41180 1078 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CHAF1BQ13112 559 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 DHRS2Q13268 280 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SFRP5Q5T4F7 317 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 CCDC107Q8WV48 283 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SFXN2Q96NB2 322 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 FBLN5Q9UBX5 448 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 ZNF230Q9UIE0 474 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 ZNF107Q9UII5 783 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 MED13Q9UHV7 2174 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 DISC1C4P0D8 188 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 H3BUI4 141 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 RAD51DO75771 328 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 IGLV3-1P01715 115 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 PMP2P02689 132 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 PRSS12P56730 875 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 RAC3P60763 192 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SEC61A1P61619 476 aaKnown RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 TGIF1Q15583 401 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SNAI3Q3KNW1 292 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 LY6G6FQ5SQ64 297 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 C12orf45Q8N5I9 185 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 SSC4DQ8WTU2 575 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 ALKBH3Q96Q83 286 aaPredicted RBP16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 UBQLN2Q9UHD9 624 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
PDLIM4-201ENST00000253754 IFNA7P01567 189 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 PATE4P0C8F1 98 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 CARD18P57730 90 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 HIST1H3AP68431 136 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 MEF2DQ14814 521 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 UBE2V2Q15819 145 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 HIST2H3PS2Q5TEC6 136 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 HIST2H3AQ71DI3 136 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 FAM109AQ8N4B1 249 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 OR10K1Q8NGX5 313 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 THOC3Q96J01 351 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 TMEM59Q9BXS4 323 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 TMPRSS13Q9BYE2 586 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 CRLF2Q9HC73 371 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 FLVCR1Q9Y5Y0 555 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 PIEZO1Q92508 2521 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 GJE1A6NN92 205 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 OR2AT4A6NND4 320 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 M0R135 149 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 HLA-AP01891 365 aaKnown RBP16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 TMEM50BP56557 158 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 SORDQ00796 357 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 SPINK14Q6IE38 97 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 STEAP2Q8NFT2 490 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 RAB3CQ96E17 227 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 ZNF799Q96GE5 643 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 PTPRBP23467 1997 aa16.38■□□□□ 0.21
PDLIM4-201ENST00000253754 GFRA3O60609 400 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 RFC3P40938 356 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 NOVA1P51513 510 aaKnown RBP16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 ZNF84P51523 738 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 CLDN15P56746 228 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 KISS1Q15726 138 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 LIN54Q6MZP7 749 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 H3F3CQ6NXT2 135 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 OR2W3Q7Z3T1 314 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 KCNG3Q8TAE7 436 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 PSMF1Q92530 271 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 ARHGAP5-AS1Q96IT6 56 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 PRRT1Q99946 306 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 CST11Q9H112 138 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 FN3KRPQ9HA64 309 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 PIGLQ9Y2B2 252 aa16.37■□□□□ 0.21
PDLIM4-201ENST00000253754 ZNF716A6NP11 495 aa16.36■□□□□ 0.21
PDLIM4-201ENST00000253754 PROB1E7EW31 1015 aa16.36■□□□□ 0.21
PDLIM4-201ENST00000253754 CCSO14618 274 aa16.36■□□□□ 0.21
PDLIM4-201ENST00000253754 DHRS3O75911 302 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms