RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 PASKQ96RG2 1323 aa28.22■■■□□ 2.11
GRAMD1B-217ENST00000640939 HIRAP54198 1017 aaPredicted RBP28.22■■■□□ 2.11
GRAMD1B-217ENST00000640939 INTS3Q68E01 1043 aaKnown RBP28.22■■■□□ 2.11
GRAMD1B-217ENST00000640939 ATF7IPQ6VMQ6 1270 aa28.22■■■□□ 2.11
GRAMD1B-217ENST00000640939 KLHDC4Q8TBB5 520 aa28.22■■■□□ 2.11
GRAMD1B-217ENST00000640939 USP17L3A6NCW0 530 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 USP17L4A6NCW7 530 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 USP17L1Q7RTZ2 530 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 SAMD7Q7Z3H4 446 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 DNAJC5GQ8N7S2 189 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 FBXW7Q969H0 707 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 CLUAP1Q96AJ1 413 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 MEIS3Q99687 375 aa28.21■■■□□ 2.11
GRAMD1B-217ENST00000640939 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.11
GRAMD1B-217ENST00000640939 LRRC24Q50LG9 513 aa28.2■■■□□ 2.1
GRAMD1B-217ENST00000640939 RIPOR2Q9Y4F9 1068 aa28.2■■■□□ 2.1
GRAMD1B-217ENST00000640939 TBC1D10BQ4KMP7 808 aaPredicted RBP28.19■■■□□ 2.1
GRAMD1B-217ENST00000640939 MXD3Q9BW11 206 aa28.19■■■□□ 2.1
GRAMD1B-217ENST00000640939 LRRFIP2Q9Y608 721 aaKnown RBP28.19■■■□□ 2.1
GRAMD1B-217ENST00000640939 EGFRP00533 1210 aa28.18■■■□□ 2.1
GRAMD1B-217ENST00000640939 RBM26Q5T8P6 1007 aaKnown RBP28.18■■■□□ 2.1
GRAMD1B-217ENST00000640939 ZKSCAN2Q63HK3 967 aa28.17■■■□□ 2.1
GRAMD1B-217ENST00000640939 C15orf52Q6ZUT6 534 aaKnown RBP28.17■■■□□ 2.1
GRAMD1B-217ENST00000640939 AGBL3Q8NEM8 1001 aa28.17■■■□□ 2.1
GRAMD1B-217ENST00000640939 ZNF646O15015 1829 aaPredicted RBP28.17■■■□□ 2.1
GRAMD1B-217ENST00000640939 RFX5P48382 616 aaPredicted RBP28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 FMR1Q06787 632 aaKnown RBP eCLIP28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 DACT2Q5SW24 774 aa28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 GMLQ99445 158 aa28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 CD209Q9NNX6 404 aa28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 MROH5Q6ZUA9 1318 aa28.16■■■□□ 2.1
GRAMD1B-217ENST00000640939 ZNF609O15014 1411 aa28.15■■■□□ 2.1
GRAMD1B-217ENST00000640939 TRAF5O00463 557 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 METTL24Q5JXM2 366 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 STRIP1Q5VSL9 837 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 ZNF804AQ7Z570 1209 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 KLRG1Q96E93 195 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 CREBZFQ9NS37 354 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 PGAP2Q9UHJ9 254 aa28.14■■■□□ 2.1
GRAMD1B-217ENST00000640939 GTF2IP78347 998 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 UBE4AQ14139 1066 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 KIF4BQ2VIQ3 1234 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 TTLL5Q6EMB2 1281 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 TMEM57Q8N5G2 664 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 ZC3H15Q8WU90 426 aaKnown RBP28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 HDAC5Q9UQL6 1122 aa28.13■■■□□ 2.09
GRAMD1B-217ENST00000640939 GNAI3P08754 354 aa28.12■■■□□ 2.09
GRAMD1B-217ENST00000640939 USP17L8P0C7I0 530 aa28.12■■■□□ 2.09
GRAMD1B-217ENST00000640939 ZNF280AP59817 542 aaPredicted RBP28.12■■■□□ 2.09
GRAMD1B-217ENST00000640939 PTPN12Q05209 780 aaKnown RBP28.12■■■□□ 2.09
GRAMD1B-217ENST00000640939 GLIS2Q9BZE0 524 aaPredicted RBP28.12■■■□□ 2.09
GRAMD1B-217ENST00000640939 TMEM88BA6NKF7 163 aa28.11■■■□□ 2.09
GRAMD1B-217ENST00000640939 EYA2O00167 538 aa28.1■■■□□ 2.09
GRAMD1B-217ENST00000640939 GYG1P46976 350 aa28.1■■■□□ 2.09
GRAMD1B-217ENST00000640939 VGLL2Q8N8G2 317 aa28.1■■■□□ 2.09
GRAMD1B-217ENST00000640939 SIL1Q9H173 461 aa28.1■■■□□ 2.09
GRAMD1B-217ENST00000640939 IL1R1P14778 569 aa28.09■■■□□ 2.09
GRAMD1B-217ENST00000640939 PDE8BO95263 885 aa28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 FAM84BQ96KN1 310 aaPredicted RBP28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 MYOZ2Q9NPC6 264 aa28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 MKRN1Q9UHC7 482 aaKnown RBP28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 JAG2Q9Y219 1238 aa28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 ASTN2O75129 1339 aaPredicted RBP28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 MYO3BQ8WXR4 1341 aa28.08■■■□□ 2.09
GRAMD1B-217ENST00000640939 ATG9AQ7Z3C6 839 aa28.07■■■□□ 2.08
GRAMD1B-217ENST00000640939 USP48Q86UV5 1035 aa28.07■■■□□ 2.08
GRAMD1B-217ENST00000640939 FTSJ3Q8IY81 847 aaKnown RBP28.07■■■□□ 2.08
GRAMD1B-217ENST00000640939 PA2G4Q9UQ80 394 aaKnown RBP28.07■■■□□ 2.08
GRAMD1B-217ENST00000640939 TRPM7Q96QT4 1865 aa28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 POLR2AP24928 1970 aaKnown RBP28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 HIBADHP31937 336 aaKnown RBP28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 DLK2Q6UY11 383 aa28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 CDC37L1Q7L3B6 337 aa28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 KIAA0825Q8IV33 1275 aa28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 DZIP1LQ8IYY4 767 aaKnown RBP28.06■■■□□ 2.08
GRAMD1B-217ENST00000640939 RLBP1P12271 317 aa28.05■■■□□ 2.08
GRAMD1B-217ENST00000640939 SCARF1Q14162 830 aa28.05■■■□□ 2.08
GRAMD1B-217ENST00000640939 CERS5Q8N5B7 392 aa28.05■■■□□ 2.08
GRAMD1B-217ENST00000640939 GNAI2P04899 355 aa28.04■■■□□ 2.08
GRAMD1B-217ENST00000640939 CST9Q5W186 159 aa28.04■■■□□ 2.08
GRAMD1B-217ENST00000640939 OGFOD1Q8N543 542 aa28.04■■■□□ 2.08
GRAMD1B-217ENST00000640939 DCPSQ96C86 337 aaKnown RBP28.04■■■□□ 2.08
GRAMD1B-217ENST00000640939 GGA3Q9NZ52 723 aa28.04■■■□□ 2.08
GRAMD1B-217ENST00000640939 SRGAP3O43295 1099 aa28.03■■■□□ 2.08
GRAMD1B-217ENST00000640939 PUM3Q15397 648 aaKnown RBP28.03■■■□□ 2.08
GRAMD1B-217ENST00000640939 KRT26Q7Z3Y9 468 aa28.03■■■□□ 2.08
GRAMD1B-217ENST00000640939 TDRD7Q8NHU6 1098 aaKnown RBP28.03■■■□□ 2.08
GRAMD1B-217ENST00000640939 ABT1Q9ULW3 272 aaKnown RBP28.03■■■□□ 2.08
GRAMD1B-217ENST00000640939 ADM5C9JUS6 153 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 CIAO1O76071 339 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 CELF2O95319 508 aaKnown RBP28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 VPS37DQ86XT2 251 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 ITPRIPQ8IWB1 547 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 ZNF408Q9H9D4 720 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 COPRSQ9NQ92 184 aa28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 IQSEC3Q9UPP2 1182 aaPredicted RBP28.02■■■□□ 2.08
GRAMD1B-217ENST00000640939 CNTNAP1P78357 1384 aa28.01■■■□□ 2.07
GRAMD1B-217ENST00000640939 SASH1O94885 1247 aa28.01■■■□□ 2.07
GRAMD1B-217ENST00000640939 FGFR2P21802 821 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms