RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-221ENST00000640341 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
SCARB2-221ENST00000640341 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
SCARB2-221ENST00000640341 RXRAP19793 462 aa17.1■□□□□ 0.33
SCARB2-221ENST00000640341 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCARB2-221ENST00000640341 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
SCARB2-221ENST00000640341 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-221ENST00000640341 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-221ENST00000640341 M0R2C6 588 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 CPLX1O14810 134 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 PFKFB2O60825 505 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
SCARB2-221ENST00000640341 ADORA1P30542 326 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 TOM1L2Q6ZVM7 507 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 CEP126Q9P2H0 1117 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 MAST3O60307 1309 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 STK38Q15208 465 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 TTC39AQ5SRH9 613 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
SCARB2-221ENST00000640341 A0A0G2JS52 829 aa17.08■□□□□ 0.33
SCARB2-221ENST00000640341 APPP05067 770 aa17.08■□□□□ 0.33
SCARB2-221ENST00000640341 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.33
SCARB2-221ENST00000640341 FOXO4P98177 505 aa17.08■□□□□ 0.33
SCARB2-221ENST00000640341 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.33
SCARB2-221ENST00000640341 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.33
SCARB2-221ENST00000640341 OSBP2Q969R2 916 aa17.08■□□□□ 0.33
SCARB2-221ENST00000640341 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
SCARB2-221ENST00000640341 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 MEGF6O75095 1541 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
SCARB2-221ENST00000640341 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 STRN4Q9NRL3 753 aa17.08■□□□□ 0.32
SCARB2-221ENST00000640341 USP27XA6NNY8 438 aa17.07■□□□□ 0.32
SCARB2-221ENST00000640341 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-221ENST00000640341 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
SCARB2-221ENST00000640341 GOLGA8BA8MQT2 603 aa17.07■□□□□ 0.32
SCARB2-221ENST00000640341 STX1AQ16623 288 aa17.07■□□□□ 0.32
SCARB2-221ENST00000640341 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
SCARB2-221ENST00000640341 RNF113AO15541 343 aaKnown RBP17.06■□□□□ 0.32
SCARB2-221ENST00000640341 SMC2O95347 1197 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 C19orf44Q9H6X5 657 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 EYA2O00167 538 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 SKILP12757 684 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
SCARB2-221ENST00000640341 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-221ENST00000640341 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 GPTP24298 496 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-221ENST00000640341 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 ALDH8A1Q9H2A2 487 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-221ENST00000640341 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
SCARB2-221ENST00000640341 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
SCARB2-221ENST00000640341 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 PCDHA7Q9UN72 937 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 SCARF1Q14162 830 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 ORC3Q9UBD5 711 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-221ENST00000640341 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
SCARB2-221ENST00000640341 HELLSQ9NRZ9 838 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 DENND2AQ9ULE3 1009 aa17.05■□□□□ 0.32
SCARB2-221ENST00000640341 PRC1O43663 620 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 NDUFA8P51970 172 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 CASP7P55210 303 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 RCOR1Q9UKL0 485 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 ZAP70P43403 619 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 FAM160A1Q05DH4 1040 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
SCARB2-221ENST00000640341 IQCB1Q15051 598 aa17.04■□□□□ 0.32
SCARB2-221ENST00000640341 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-221ENST00000640341 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 IMMTQ16891 758 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 DSCC1Q9BVC3 393 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 H7C1W4 665 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 FGAP02671 866 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 CARMIL3Q8ND23 1372 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 FDPSP14324 419 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 CEP135Q66GS9 1140 aa17.03■□□□□ 0.32
SCARB2-221ENST00000640341 RBM43Q6ZSC3 357 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 MRPS27Q92552 414 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
SCARB2-221ENST00000640341 PUS7LQ9H0K6 701 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms