RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 MKRN1Q9UHC7 482 aaKnown RBP8.16□□□□□ -1.1
RTTN-215ENST00000639487 SMARCA1P28370 1054 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 GLIPR1L2Q4G1C9 344 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 SBK1Q52WX2 424 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 AKAP2Q9Y2D5 859 aa8.16□□□□□ -1.1
RTTN-215ENST00000639487 ZNFX1Q9P2E3 1918 aaKnown RBP8.15□□□□□ -1.1
RTTN-215ENST00000639487 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
RTTN-215ENST00000639487 HOOK2Q96ED9 719 aa8.15□□□□□ -1.1
RTTN-215ENST00000639487 PNMA2Q9UL42 364 aa8.15□□□□□ -1.1
RTTN-215ENST00000639487 IRF6O14896 467 aa8.15□□□□□ -1.11
RTTN-215ENST00000639487 UQCRFS1P1P0C7P4 283 aa8.15□□□□□ -1.11
RTTN-215ENST00000639487 PTPN12Q05209 780 aaKnown RBP8.15□□□□□ -1.11
RTTN-215ENST00000639487 EXOSC9Q06265 439 aaKnown RBP8.15□□□□□ -1.11
RTTN-215ENST00000639487 C12orf42Q96LP6 360 aa8.15□□□□□ -1.11
RTTN-215ENST00000639487 KCNQ3O43525 872 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 ZPR1O75312 459 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 HMOX1P09601 288 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 TRIM27P14373 513 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 LMNB1P20700 586 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
RTTN-215ENST00000639487 CEP85Q6P2H3 762 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 ALPK3Q96L96 1907 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 PTF1AQ7RTS3 328 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 MIER1Q8N108 512 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 FRMPD4Q14CM0 1322 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 ENTPD3O75355 529 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 ATP5JP18859 108 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 RFC4P35249 363 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 FKBP8Q14318 412 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 USPL1Q5W0Q7 1092 aa8.14□□□□□ -1.11
RTTN-215ENST00000639487 ZMYM2Q9UBW7 1377 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 NEXNQ0ZGT2 675 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 TTLL6Q8N841 843 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 CNBD1Q8NA66 436 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 ZDHHC15Q96MV8 337 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 SEZ6LQ9BYH1 1024 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 NFKBIEO00221 500 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
RTTN-215ENST00000639487 GNPATO15228 680 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 NUTM2GQ5VZR2 741 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 LPIN2Q92539 896 aa8.13□□□□□ -1.11
RTTN-215ENST00000639487 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 BAZ2AQ9UIF9 1905 aaKnown RBP8.12□□□□□ -1.11
RTTN-215ENST00000639487 EYA2O00167 538 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 SLC26A4O43511 780 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 EVCP57679 992 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 TSPYL6Q8N831 410 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 PUM3Q15397 648 aaKnown RBP8.12□□□□□ -1.11
RTTN-215ENST00000639487 HLFQ16534 295 aa8.12□□□□□ -1.11
RTTN-215ENST00000639487 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
RTTN-215ENST00000639487 MYH7BA7E2Y1 1941 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 GNAI2P04899 355 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 ZFYP08048 801 aaPredicted RBP8.11□□□□□ -1.11
RTTN-215ENST00000639487 MCCD1P59942 119 aaPredicted RBP8.11□□□□□ -1.11
RTTN-215ENST00000639487 CCDC96Q2M329 555 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 PROSER3Q2NL68 480 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 GNRH1P01148 92 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 COPS6Q7L5N1 327 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 SYT17Q9BSW7 474 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
RTTN-215ENST00000639487 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 NUCB1Q02818 461 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 TTF1Q15361 905 aaPredicted RBP8.1□□□□□ -1.11
RTTN-215ENST00000639487 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
RTTN-215ENST00000639487 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
RTTN-215ENST00000639487 NRBP1Q9UHY1 535 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 MAP3K2Q9Y2U5 619 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 H0YIN7 160 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 UBE3CQ15386 1083 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 POLR2AP24928 1970 aaKnown RBP8.1□□□□□ -1.11
RTTN-215ENST00000639487 RASSF10A6NK89 507 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 PDE8BO95263 885 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 IARSP41252 1262 aaKnown RBP8.1□□□□□ -1.11
RTTN-215ENST00000639487 TNIP1Q15025 636 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 DACT2Q5SW24 774 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 HAUS7Q99871 368 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 RCAN3Q9UKA8 241 aa8.1□□□□□ -1.11
RTTN-215ENST00000639487 NUTM2FA1L443 756 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 GLTPD2A6NH11 291 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 TTLL7Q6ZT98 887 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
RTTN-215ENST00000639487 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 DENND2AQ9ULE3 1009 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 POTECB2RU33 542 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 HIP1O00291 1037 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 ATP2A1O14983 1001 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 AGXT2Q9BYV1 514 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
RTTN-215ENST00000639487 GPR75-ASB3A0A0A6YYF3 556 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 FBLN1P23142 703 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 SLF2Q8IX21 1173 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 ZNRF3Q9ULT6 936 aa8.08□□□□□ -1.12
RTTN-215ENST00000639487 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms