RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 CCNJLQ8IV13 435 aa10.28□□□□□ -0.76
FAM49B-230ENST00000639004 TMEM102Q8N9M5 508 aaPredicted RBP10.28□□□□□ -0.76
FAM49B-230ENST00000639004 PLD4Q96BZ4 506 aa10.28□□□□□ -0.76
FAM49B-230ENST00000639004 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
FAM49B-230ENST00000639004 SRCIN1Q9C0H9 1055 aa10.28□□□□□ -0.76
FAM49B-230ENST00000639004 TRAK1Q9UPV9 953 aa10.28□□□□□ -0.76
FAM49B-230ENST00000639004 CTSHP09668 335 aa10.27□□□□□ -0.77
FAM49B-230ENST00000639004 ALAS2P22557 587 aa10.27□□□□□ -0.77
FAM49B-230ENST00000639004 TREML4Q6UXN2 200 aa10.27□□□□□ -0.77
FAM49B-230ENST00000639004 BHLHE41Q9C0J9 482 aaPredicted RBP10.27□□□□□ -0.77
FAM49B-230ENST00000639004 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
FAM49B-230ENST00000639004 FRRS1LQ9P0K9 344 aa10.27□□□□□ -0.77
FAM49B-230ENST00000639004 STARD13Q9Y3M8 1113 aa10.27□□□□□ -0.77
FAM49B-230ENST00000639004 PDE2AO00408 941 aaPredicted RBP10.26□□□□□ -0.77
FAM49B-230ENST00000639004 TSNAXIP1Q2TAA8 658 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
FAM49B-230ENST00000639004 PSAPL1Q6NUJ1 521 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 ELMSAN1Q6PJG2 1045 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 EDARADDQ8WWZ3 215 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 NXPE3Q969Y0 559 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 BACH2Q9BYV9 841 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 FAM8A1Q9UBU6 413 aa10.26□□□□□ -0.77
FAM49B-230ENST00000639004 OIP5O43482 229 aa10.25□□□□□ -0.77
FAM49B-230ENST00000639004 USP17L7P0C7H9 530 aa10.25□□□□□ -0.77
FAM49B-230ENST00000639004 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
FAM49B-230ENST00000639004 GALNT6Q8NCL4 622 aa10.25□□□□□ -0.77
FAM49B-230ENST00000639004 POP1Q99575 1024 aaKnown RBP10.25□□□□□ -0.77
FAM49B-230ENST00000639004 METTL12A8MUP2 240 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
FAM49B-230ENST00000639004 BCRP11274 1271 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 GRIA4P48058 902 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 LYPD4Q6UWN0 246 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 ADAMTSL4Q6UY14 1074 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 CRELD1Q96HD1 420 aa10.24□□□□□ -0.77
FAM49B-230ENST00000639004 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 SHISA8B8ZZ34 492 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 CELA2BP08218 269 aaPredicted RBP10.23□□□□□ -0.77
FAM49B-230ENST00000639004 FCGRTP55899 365 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 C3orf58Q8NDZ4 430 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 TTC9Q92623 222 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
FAM49B-230ENST00000639004 ALBP02768 609 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 GSTT1P30711 240 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 SPRED3Q2MJR0 410 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 CHSY3Q70JA7 882 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 WHAMMQ8TF30 809 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 NUDT8Q8WV74 236 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 IGSF5Q9NSI5 407 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 LRRC4BQ9NT99 713 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 TRIM33Q9UPN9 1127 aa10.22□□□□□ -0.77
FAM49B-230ENST00000639004 RGS9O75916 674 aaPredicted RBP10.21□□□□□ -0.77
FAM49B-230ENST00000639004 ITPKAP23677 461 aa10.21□□□□□ -0.77
FAM49B-230ENST00000639004 KANK3Q6NY19 840 aa10.21□□□□□ -0.77
FAM49B-230ENST00000639004 ASAP3Q8TDY4 903 aa10.21□□□□□ -0.77
FAM49B-230ENST00000639004 BTBD6Q96KE9 485 aa10.21□□□□□ -0.77
FAM49B-230ENST00000639004 A0A096LPE4 126 aa10.2□□□□□ -0.78
FAM49B-230ENST00000639004 A0A1W2PPZ6 126 aa10.2□□□□□ -0.78
FAM49B-230ENST00000639004 GRIK5Q16478 980 aa10.2□□□□□ -0.78
FAM49B-230ENST00000639004 TMEM87AQ8NBN3 555 aa10.2□□□□□ -0.78
FAM49B-230ENST00000639004 JPH1Q9HDC5 661 aaPredicted RBP10.2□□□□□ -0.78
FAM49B-230ENST00000639004 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
FAM49B-230ENST00000639004 PTPRAP18433 802 aa10.19□□□□□ -0.78
FAM49B-230ENST00000639004 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
FAM49B-230ENST00000639004 DTHD1Q6ZMT9 781 aa10.19□□□□□ -0.78
FAM49B-230ENST00000639004 LACRTQ9GZZ8 138 aa10.19□□□□□ -0.78
FAM49B-230ENST00000639004 ADAM19Q9H013 955 aa10.19□□□□□ -0.78
FAM49B-230ENST00000639004 M0R082 166 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 TCF3P15923 654 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
FAM49B-230ENST00000639004 ZNF385CQ66K41 422 aaPredicted RBP10.18□□□□□ -0.78
FAM49B-230ENST00000639004 GDF6Q6KF10 455 aaPredicted RBP10.18□□□□□ -0.78
FAM49B-230ENST00000639004 C8orf86Q6ZUL3 223 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 ZNF417Q8TAU3 575 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 BSNDQ8WZ55 320 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 ZNF587Q96SQ5 575 aaPredicted RBP10.18□□□□□ -0.78
FAM49B-230ENST00000639004 MUC3BQ9H195 1237 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 SOX13Q9UN79 622 aa10.18□□□□□ -0.78
FAM49B-230ENST00000639004 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
FAM49B-230ENST00000639004 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
FAM49B-230ENST00000639004 AFF1P51825 1210 aaKnown RBP10.17□□□□□ -0.78
FAM49B-230ENST00000639004 ZNF576Q9H609 170 aa10.17□□□□□ -0.78
FAM49B-230ENST00000639004 AKAP2Q9Y2D5 859 aa10.17□□□□□ -0.78
FAM49B-230ENST00000639004 SCAMP3O14828 347 aaKnown RBP10.16□□□□□ -0.78
FAM49B-230ENST00000639004 LILRB5O75023 590 aa10.16□□□□□ -0.78
FAM49B-230ENST00000639004 AMPD1P23109 780 aa10.16□□□□□ -0.78
FAM49B-230ENST00000639004 ST13P50502 369 aaKnown RBP10.16□□□□□ -0.78
FAM49B-230ENST00000639004 TAF1CQ15572 869 aaPredicted RBP10.16□□□□□ -0.78
FAM49B-230ENST00000639004 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
FAM49B-230ENST00000639004 CDC27P30260 824 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 FANCCQ00597 558 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 MAP3K10Q02779 954 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 VN1R5Q7Z5H4 357 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 ANKRD24Q8TF21 1146 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 ZFYVE1Q9HBF4 777 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
FAM49B-230ENST00000639004 SH2B1Q9NRF2 756 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms