RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 ZNF496Q96IT1 587 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 CCZ1BP86790 482 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 NEURL1BA8MQ27 555 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 TEX35Q5T0J7 233 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 CMTR1Q8N1G2 835 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 PHKBQ93100 1093 aa13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-246ENST00000638848 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 SLU7O95391 586 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 GCKRQ14397 625 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 TTC5Q8N0Z6 440 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 KARSQ15046 597 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 DPF2Q92785 391 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 DESI2Q9BSY9 194 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 PNOCQ13519 176 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 KDRP35968 1356 aa13.24□□□□□ -0.29
KCNMA1-246ENST00000638848 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 FAM160A1Q05DH4 1040 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 ARMCX5Q6P1M9 558 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 ZNF397Q8NF99 534 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 MRPS27Q92552 414 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 E7EWF7 191 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 ELP1O95163 1332 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 E4F1Q66K89 784 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 DHX32Q7L7V1 743 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 PTPRUQ92729 1446 aa13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-246ENST00000638848 IFIT1P09914 478 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 RRP12Q5JTH9 1297 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 KLHL10Q6JEL2 608 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 IP6K1Q92551 441 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 FEZ1Q99689 392 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 ZNF446Q9NWS9 450 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 ZNF609O15014 1411 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 UBXN4Q92575 508 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 NAT10Q9H0A0 1025 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
KCNMA1-246ENST00000638848 FOXN1O15353 648 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 KIF20AO95235 890 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 ADKP55263 362 aaKnown RBP13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 M0R2C6 588 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 TFRCP02786 760 aaKnown RBP13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 CLCN6P51797 869 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 KRT32Q14532 448 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 TERF2Q15554 542 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 NBPF11Q86T75 865 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.29
KCNMA1-246ENST00000638848 GCP02774 474 aa13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 TAF7LQ5H9L4 462 aa13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 ZNF790Q6PG37 636 aa13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
KCNMA1-246ENST00000638848 ZNF202O95125 648 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 ADORA1P30542 326 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 UBASH3AP57075 661 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 SPTLC2O15270 562 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 GNG11P61952 73 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 ZKSCAN3Q9BRR0 538 aa13.2□□□□□ -0.3
KCNMA1-246ENST00000638848 hCG_1642624A0A1W2PR95 340 aa13.19□□□□□ -0.3
KCNMA1-246ENST00000638848 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
KCNMA1-246ENST00000638848 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
KCNMA1-246ENST00000638848 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
KCNMA1-246ENST00000638848 STX17P56962 302 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms