RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 CCDC158Q5M9N0 1113 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 CHMP4CQ96CF2 233 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 LLPHQ9BRT6 129 aaKnown RBP9.55□□□□□ -0.88
SCARB2-211ENST00000638603 NPHP4O75161 1426 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-211ENST00000638603 FAM160A1Q05DH4 1040 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 PLA2G4DQ86XP0 818 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 CWC25Q9NXE8 425 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-211ENST00000638603 NAA16Q6N069 864 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-211ENST00000638603 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-211ENST00000638603 PAXBP1Q9Y5B6 917 aa9.55□□□□□ -0.88
SCARB2-211ENST00000638603 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 GOLGA8BA8MQT2 603 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 NAA30Q147X3 362 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 CCDC57Q2TAC2 916 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 USPL1Q5W0Q7 1092 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 HOMER1Q86YM7 354 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 ERBB3P21860 1342 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 HSPD1P10809 573 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 TRDNQ13061 729 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 IMMTQ16891 758 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 LRRFIP1Q32MZ4 808 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 ZNF771Q7L3S4 317 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 LRRC8AQ8IWT6 810 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 GOLPH3LQ9H4A5 285 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 ORC3Q9UBD5 711 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 ZNF609O15014 1411 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 KLF18A0A0U1RQI7 1052 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 A0A1B0GUL7 405 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 ATF3P18847 181 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 LRRC24Q50LG9 513 aa9.54□□□□□ -0.88
SCARB2-211ENST00000638603 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-211ENST00000638603 IL15P40933 162 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 DCAF5Q96JK2 942 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 NCAPD2Q15021 1401 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 PDIA3P30101 505 aaKnown RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 RFX5P48382 616 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 TTLL7Q6ZT98 887 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 CTNNA3Q9UI47 895 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 NEMFO60524 1076 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 COL15A1P39059 1388 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 ADGRL3Q9HAR2 1447 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 A1BGP04217 495 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 MARCKSP29966 332 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-211ENST00000638603 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 PCDHA7Q9UN72 937 aa9.53□□□□□ -0.88
SCARB2-211ENST00000638603 LRRC37A3O60309 1634 aa9.52□□□□□ -0.88
SCARB2-211ENST00000638603 KIF18AQ8NI77 898 aa9.52□□□□□ -0.88
SCARB2-211ENST00000638603 A0A0G2JS52 829 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 USP27XA6NNY8 438 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 EYA2O00167 538 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 PRC1O43663 620 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 NFXL1Q6ZNB6 911 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 SMARCC2Q8TAQ2 1214 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 PUS3Q9BZE2 481 aaKnown RBP9.52□□□□□ -0.89
SCARB2-211ENST00000638603 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 CTDNEP1O95476 244 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 SFPQP23246 707 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCARB2-211ENST00000638603 NCBP1Q09161 790 aaKnown RBP9.52□□□□□ -0.89
SCARB2-211ENST00000638603 IQCB1Q15051 598 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 RBM43Q6ZSC3 357 aaKnown RBP9.52□□□□□ -0.89
SCARB2-211ENST00000638603 GJB4Q9NTQ9 266 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 IFNKQ9P0W0 207 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 ARHGAP23Q9P227 1491 aa9.52□□□□□ -0.89
SCARB2-211ENST00000638603 SPTLC2O15270 562 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 RXRAP19793 462 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 ZMYM1Q5SVZ6 1142 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 STK11IPQ8N1F8 1099 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 MRFAP1L1Q96HT8 127 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 CGNQ9P2M7 1197 aaKnown RBP9.51□□□□□ -0.89
SCARB2-211ENST00000638603 MAST3O60307 1309 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 ZNF213O14771 459 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-211ENST00000638603 NDUFA8P51970 172 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 CPLX2Q6PUV4 134 aaKnown RBP9.51□□□□□ -0.89
SCARB2-211ENST00000638603 CLIC4Q9Y696 253 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 SLIT1O75093 1534 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 M0R2C6 588 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 CYP27B1O15528 508 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 RABL6Q3YEC7 729 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-211ENST00000638603 TOM1L2Q6ZVM7 507 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 SH3TC1Q8TE82 1336 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 SERPINC1P01008 464 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 GSDMDP57764 484 aa9.51□□□□□ -0.89
SCARB2-211ENST00000638603 CARMIL3Q8ND23 1372 aa9.5□□□□□ -0.89
SCARB2-211ENST00000638603 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
SCARB2-211ENST00000638603 IDH1O75874 414 aaKnown RBP9.5□□□□□ -0.89
SCARB2-211ENST00000638603 KCNG4Q8TDN1 519 aa9.5□□□□□ -0.89
SCARB2-211ENST00000638603 OSBP2Q969R2 916 aa9.5□□□□□ -0.89
SCARB2-211ENST00000638603 ZNF274Q96GC6 653 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-211ENST00000638603 ZNF215Q9UL58 517 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms