RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
UBE3A-227ENST00000638011 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
UBE3A-227ENST00000638011 CCT6BQ92526 530 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 GJB2P29033 226 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 USP5P45974 858 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 PRKAR2BP31323 418 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 MAP3K12Q12852 859 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 SEL1L2Q5TEA6 688 aa17■□□□□ 0.31
UBE3A-227ENST00000638011 EVCP57679 992 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 ZNF213O14771 459 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 ZSCAN26Q16670 478 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 ARMC9Q7Z3E5 817 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 FAF1Q9UNN5 650 aaPredicted RBP16.99■□□□□ 0.31
UBE3A-227ENST00000638011 KDM4AO75164 1064 aa16.99■□□□□ 0.31
UBE3A-227ENST00000638011 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
UBE3A-227ENST00000638011 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
UBE3A-227ENST00000638011 LRRC23Q53EV4 343 aaPredicted RBP16.98■□□□□ 0.31
UBE3A-227ENST00000638011 NEK11Q8NG66 645 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 NRBF2Q96F24 287 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 SIL1Q9H173 461 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 GTF3C6Q969F1 213 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 TYRO3Q06418 890 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 C8orf74Q6P047 294 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 ANKRD12Q6UB98 2062 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 BRD3Q15059 726 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 HSPA1LP34931 641 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 VSIG1Q86XK7 387 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
UBE3A-227ENST00000638011 KIF1CO43896 1103 aaKnown RBP16.97■□□□□ 0.31
UBE3A-227ENST00000638011 PSMD1Q99460 953 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 ZC3H15Q8WU90 426 aaKnown RBP16.97■□□□□ 0.31
UBE3A-227ENST00000638011 NAPGQ99747 312 aaPredicted RBP16.97■□□□□ 0.31
UBE3A-227ENST00000638011 CCDC68Q9H2F9 335 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 PAK2Q13177 524 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 INTS4Q96HW7 963 aaKnown RBP16.97■□□□□ 0.31
UBE3A-227ENST00000638011 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 RGS22Q8NE09 1264 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 ERCC3P19447 782 aa16.97■□□□□ 0.31
UBE3A-227ENST00000638011 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.96■□□□□ 0.31
UBE3A-227ENST00000638011 IGHMBP2P38935 993 aaKnown RBP16.96■□□□□ 0.31
UBE3A-227ENST00000638011 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
UBE3A-227ENST00000638011 ESRRGP62508 458 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 DENND2CQ68D51 928 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 GOLGA8AA7E2F4 631 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 SNCBQ16143 134 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 IFT81Q8WYA0 676 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 BAG1Q99933 345 aaPredicted RBP16.96■□□□□ 0.31
UBE3A-227ENST00000638011 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 ZNF131P52739 623 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 PRPF40BQ6NWY9 871 aaKnown RBP16.96■□□□□ 0.31
UBE3A-227ENST00000638011 FAM169AQ9Y6X4 670 aa16.96■□□□□ 0.31
UBE3A-227ENST00000638011 RNF40O75150 1001 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
UBE3A-227ENST00000638011 BCAR3O75815 825 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 XAB2Q9HCS7 855 aaKnown RBP16.95■□□□□ 0.3
UBE3A-227ENST00000638011 EPS15L1Q9UBC2 864 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
UBE3A-227ENST00000638011 CRCPO75575 148 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 PPP1R9AQ9ULJ8 1098 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 PDE4BQ07343 736 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 MAK16Q9BXY0 300 aaKnown RBP16.95■□□□□ 0.3
UBE3A-227ENST00000638011 RAB17Q9H0T7 212 aa16.95■□□□□ 0.3
UBE3A-227ENST00000638011 HPDP32754 393 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 SDCCAG3Q96C92 435 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 SYCE1Q8N0S2 351 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 SCINQ9Y6U3 715 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 AKR1B15C9JRZ8 316 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 PHACTR2O75167 634 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 P3H4Q92791 437 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 CCDC124Q96CT7 223 aaKnown RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 BIN1O00499 593 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 OPHN1O60890 802 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 STK10O94804 968 aaKnown RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 KIFAP3Q92845 792 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 CACYBPQ9HB71 228 aaKnown RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 CYP26C1Q6V0L0 522 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 BRAPQ7Z569 592 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 SMIM24O75264 130 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 INPP1P49441 399 aa16.94■□□□□ 0.3
UBE3A-227ENST00000638011 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-227ENST00000638011 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 CENPKQ9BS16 269 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 CNNM2Q9H8M5 875 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 HOMER3Q9NSC5 361 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 KLHL14Q9P2G3 628 aa16.93■□□□□ 0.3
UBE3A-227ENST00000638011 CAMSAP2Q08AD1 1489 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms