RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
CACNA1A-225ENST00000636389 ZNF408Q9H9D4 720 aa19.77■□□□□ 0.76
CACNA1A-225ENST00000636389 SH2D4BQ5SQS7 431 aa19.77■□□□□ 0.76
CACNA1A-225ENST00000636389 GPHNQ9NQX3 736 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-225ENST00000636389 GINS2Q9Y248 185 aa19.77■□□□□ 0.76
CACNA1A-225ENST00000636389 FMNL3Q8IVF7 1028 aa19.77■□□□□ 0.75
CACNA1A-225ENST00000636389 FAM204AQ9H8W3 233 aa19.77■□□□□ 0.75
CACNA1A-225ENST00000636389 PKD2L1Q9P0L9 805 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 FAM114A2Q9NRY5 505 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 WAPLQ7Z5K2 1190 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 NCAPGQ9BPX3 1015 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 DDX19AQ9NUU7 478 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 ATP11AP98196 1134 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 LRRC43Q8N309 656 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 AFAP1L2Q8N4X5 818 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 NEK11Q8NG66 645 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 SETDB2Q96T68 719 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 SWAP70Q9UH65 585 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 INTS8Q75QN2 995 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 SAMD15Q9P1V8 674 aa19.76■□□□□ 0.75
CACNA1A-225ENST00000636389 CLUL1Q15846 466 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 IQSEC3Q9UPP2 1182 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 ZGPATQ8N5A5 531 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 FRMD4BQ9Y2L6 1034 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 F6X3S4 739 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 DDX27Q96GQ7 796 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 CTAGE15A4D2H0 777 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 CTAGE8P0CG41 777 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 CTAGE6Q86UF2 777 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 CTAGE4Q8IX94 777 aa19.75■□□□□ 0.75
CACNA1A-225ENST00000636389 STX10O60499 249 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 STK10O94804 968 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 RPAP2Q8IXW5 612 aaPredicted RBP19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 VCX3BQ9H321 246 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 ZNF165P49910 485 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 UBXN1Q04323 297 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 MCM5P33992 734 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
CACNA1A-225ENST00000636389 XRCC6P12956 609 aaKnown RBP eCLIP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 MCM7P33993 719 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 RTN1Q16799 776 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 SLC4A4Q9Y6R1 1079 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 IVLP07476 585 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 CYP7A1P22680 504 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 ATP6V1E1P36543 226 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 MTRF1LQ9UGC7 380 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 TRAF1Q13077 416 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 NFE2L2Q16236 605 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 WDR44Q5JSH3 913 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 CASC4Q6P4E1 433 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 PAXBP1Q9Y5B6 917 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 CCDC171Q6TFL3 1326 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 FNBP1Q96RU3 617 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 PSMA7O14818 248 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 SEL1L2Q5TEA6 688 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 RAB3IPQ96QF0 476 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 HAUS2Q9NVX0 235 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 VIMP08670 466 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 SPDYE16A6NNV3 312 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 SPDYE2Q495Y8 402 aa19.73■□□□□ 0.75
CACNA1A-225ENST00000636389 PPP4R4Q6NUP7 873 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 PSPC1Q8WXF1 523 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 KRT23Q9C075 422 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 GJA3Q9Y6H8 435 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 ACSBG1Q96GR2 724 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 BIRC3Q13489 604 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 NEDD9Q14511 834 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 NSMCE1Q8WV22 266 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 NEK1Q96PY6 1258 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 LEO1Q8WVC0 666 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 NAIPQ13075 1403 aa19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 GABPB2Q8TAK5 448 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 RRP36Q96EU6 259 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-225ENST00000636389 MARCKSP29966 332 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 LACTBP83111 547 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 CCDC125Q86Z20 511 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 ALG1Q9BT22 464 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 CCT6AP40227 531 aaKnown RBP19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 AMOTQ4VCS5 1084 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 ANO3Q9BYT9 981 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 PLCB4Q15147 1175 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 C4orf50Q6ZRC1 276 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 ZBTB43O43298 467 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 HS2ST1Q7LGA3 356 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 GPR161Q8N6U8 529 aaKnown RBP19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 MTUS1Q9ULD2 1270 aa19.71■□□□□ 0.75
CACNA1A-225ENST00000636389 VPS18Q9P253 973 aa19.7■□□□□ 0.74
CACNA1A-225ENST00000636389 RBM27Q9P2N5 1060 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-225ENST00000636389 RABGAP1Q9Y3P9 1069 aa19.7■□□□□ 0.74
CACNA1A-225ENST00000636389 HGSO14964 777 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-225ENST00000636389 ZNF131P52739 623 aa19.7■□□□□ 0.74
CACNA1A-225ENST00000636389 ARHGEF2Q92974 986 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms