RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	FANCI	Q9NVI1	1328 aa		28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	USP17L8	P0C7I0	530 aa		28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	CCT4	P50991	539 aa	Known RBP	28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	FLII	Q13045	1269 aa		28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	ANGEL2	Q5VTE6	544 aa	Known RBP	28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	MYOZ2	Q9NPC6	264 aa		28.55	■■■□□ 2.16
SRRM2-231	ENST00000630499	PITPNM2	Q9BZ72	1349 aa		28.54	■■■□□ 2.16
SRRM2-231	ENST00000630499	DACT2	Q5SW24	774 aa		28.54	■■■□□ 2.16
SRRM2-231	ENST00000630499	TXNRD3	Q86VQ6	643 aa		28.54	■■■□□ 2.16
SRRM2-231	ENST00000630499	CSF1R	P07333	972 aa		28.53	■■■□□ 2.16
SRRM2-231	ENST00000630499	CCDC102A	Q96A19	550 aa		28.53	■■■□□ 2.16
SRRM2-231	ENST00000630499	AKAP11	Q9UKA4	1901 aa		28.53	■■■□□ 2.16
SRRM2-231	ENST00000630499	SLC10A3	P09131	477 aa		28.52	■■■□□ 2.16
SRRM2-231	ENST00000630499	TNRC18	O15417	2968 aa	Predicted RBP	28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	VAMP4	O75379	141 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	ZNF157	P51786	506 aa	Predicted RBP	28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	KIF23	Q02241	960 aa	Predicted RBP	28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	FAM161A	Q3B820	660 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	MXD3	Q9BW11	206 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	MCOLN1	Q9GZU1	580 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	SAGE1	Q9NXZ1	904 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	LEMD3	Q9Y2U8	911 aa		28.5	■■■□□ 2.15
SRRM2-231	ENST00000630499	IRS2	Q9Y4H2	1338 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	ITGA6	P23229	1130 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	KLRK1	P26718	216 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	LINS1	Q8NG48	757 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	DNAAF4	Q8WXU2	420 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	COA1	Q9GZY4	146 aa		28.49	■■■□□ 2.15
SRRM2-231	ENST00000630499	RGS19	P49795	217 aa		28.48	■■■□□ 2.15
SRRM2-231	ENST00000630499	NBPF9	Q3BBW0	867 aa		28.48	■■■□□ 2.15
SRRM2-231	ENST00000630499	STRIP1	Q5VSL9	837 aa		28.48	■■■□□ 2.15
SRRM2-231	ENST00000630499	FKBP1B	P68106	108 aa		28.47	■■■□□ 2.15
SRRM2-231	ENST00000630499	WDR63	Q8IWG1	891 aa		28.47	■■■□□ 2.15
SRRM2-231	ENST00000630499	IGHMBP2	P38935	993 aa	Known RBP	28.46	■■■□□ 2.15
SRRM2-231	ENST00000630499	FKBP5	Q13451	457 aa	Predicted RBP	28.46	■■■□□ 2.15
SRRM2-231	ENST00000630499	RASAL3	Q86YV0	1011 aa		28.46	■■■□□ 2.15
SRRM2-231	ENST00000630499	CSRNP1	Q96S65	589 aa		28.46	■■■□□ 2.15
SRRM2-231	ENST00000630499	ZNF804B	A4D1E1	1349 aa		28.45	■■■□□ 2.15
SRRM2-231	ENST00000630499	MYO3B	Q8WXR4	1341 aa		28.45	■■■□□ 2.15
SRRM2-231	ENST00000630499	MYH16	Q9H6N6	1097 aa		28.45	■■■□□ 2.14
SRRM2-231	ENST00000630499	MRS2	Q9HD23	443 aa		28.45	■■■□□ 2.14
SRRM2-231	ENST00000630499	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.45	■■■□□ 2.14
SRRM2-231	ENST00000630499	RNF186	Q9NXI6	227 aa		28.45	■■■□□ 2.14
SRRM2-231	ENST00000630499	SCAF8	Q9UPN6	1271 aa	Known RBP	28.45	■■■□□ 2.14
SRRM2-231	ENST00000630499	WNT10B	O00744	389 aa		28.44	■■■□□ 2.14
SRRM2-231	ENST00000630499	EXOSC9	Q06265	439 aa	Known RBP	28.44	■■■□□ 2.14
SRRM2-231	ENST00000630499	ZBED3	Q96IU2	234 aa	Predicted RBP	28.44	■■■□□ 2.14
SRRM2-231	ENST00000630499	ANKRD2	Q9GZV1	360 aa		28.44	■■■□□ 2.14
SRRM2-231	ENST00000630499	CCDC85C	A6NKD9	419 aa		28.43	■■■□□ 2.14
SRRM2-231	ENST00000630499	FOXO4	P98177	505 aa		28.43	■■■□□ 2.14
SRRM2-231	ENST00000630499	MOB2	Q70IA6	237 aa		28.42	■■■□□ 2.14
SRRM2-231	ENST00000630499	MMP14	P50281	582 aa		28.41	■■■□□ 2.14
SRRM2-231	ENST00000630499	CHRND	Q07001	517 aa		28.41	■■■□□ 2.14
SRRM2-231	ENST00000630499	BEND3	Q5T5X7	828 aa		28.41	■■■□□ 2.14
SRRM2-231	ENST00000630499	DGKZ	Q13574	1117 aa		28.4	■■■□□ 2.14
SRRM2-231	ENST00000630499	PRAMEF18	Q5VWM3	479 aa		28.4	■■■□□ 2.14
SRRM2-231	ENST00000630499	C15orf52	Q6ZUT6	534 aa	Known RBP	28.4	■■■□□ 2.14
SRRM2-231	ENST00000630499	ECM29	Q5VYK3	1845 aa		28.4	■■■□□ 2.14
SRRM2-231	ENST00000630499	SNAP23	O00161	211 aa		28.39	■■■□□ 2.14
SRRM2-231	ENST00000630499	TRPA1	O75762	1119 aa		28.39	■■■□□ 2.14
SRRM2-231	ENST00000630499	TTLL5	Q6EMB2	1281 aa		28.39	■■■□□ 2.14
SRRM2-231	ENST00000630499	OGFOD1	Q8N543	542 aa		28.39	■■■□□ 2.14
SRRM2-231	ENST00000630499	MPHOSPH8	Q99549	860 aa		28.39	■■■□□ 2.14
SRRM2-231	ENST00000630499		F6X3S4	739 aa		28.38	■■■□□ 2.13
SRRM2-231	ENST00000630499	SASH1	O94885	1247 aa		28.37	■■■□□ 2.13
SRRM2-231	ENST00000630499	REM2	Q8IYK8	340 aa	Predicted RBP	28.37	■■■□□ 2.13
SRRM2-231	ENST00000630499	CD209	Q9NNX6	404 aa		28.37	■■■□□ 2.13
SRRM2-231	ENST00000630499	ANKRD18B	A2A2Z9	1011 aa		28.36	■■■□□ 2.13
SRRM2-231	ENST00000630499	UBE2Q2L	H0YL09	131 aa		28.36	■■■□□ 2.13
SRRM2-231	ENST00000630499	EPHA10	Q5JZY3	1008 aa		28.36	■■■□□ 2.13
SRRM2-231	ENST00000630499	CERS5	Q8N5B7	392 aa		28.36	■■■□□ 2.13
SRRM2-231	ENST00000630499	SALL2	Q9Y467	1007 aa	Predicted RBP	28.36	■■■□□ 2.13
SRRM2-231	ENST00000630499	LAMB1	P07942	1786 aa		28.35	■■■□□ 2.13
SRRM2-231	ENST00000630499	GTF2I	P78347	998 aa		28.35	■■■□□ 2.13
SRRM2-231	ENST00000630499	KIAA0825	Q8IV33	1275 aa		28.35	■■■□□ 2.13
SRRM2-231	ENST00000630499	FBXW7	Q969H0	707 aa		28.35	■■■□□ 2.13
SRRM2-231	ENST00000630499	TAF5L	O75529	589 aa		28.34	■■■□□ 2.13
SRRM2-231	ENST00000630499	IL1R1	P14778	569 aa		28.32	■■■□□ 2.12
SRRM2-231	ENST00000630499	IFIT5	Q13325	482 aa	Known RBP	28.32	■■■□□ 2.12
SRRM2-231	ENST00000630499	MTMR14	Q8NCE2	650 aa		28.32	■■■□□ 2.12
SRRM2-231	ENST00000630499	HELB	Q8NG08	1087 aa	Predicted RBP	28.32	■■■□□ 2.12
SRRM2-231	ENST00000630499	COL1A1	P02452	1464 aa	Predicted RBP	28.32	■■■□□ 2.12
SRRM2-231	ENST00000630499	ANP32C	O43423	234 aa		28.31	■■■□□ 2.12
SRRM2-231	ENST00000630499	MLLT1	Q03111	559 aa	Predicted RBP	28.31	■■■□□ 2.12
SRRM2-231	ENST00000630499	LMBR1L	Q6UX01	489 aa		28.31	■■■□□ 2.12
SRRM2-231	ENST00000630499	SSC5D	A1L4H1	1573 aa		28.3	■■■□□ 2.12
SRRM2-231	ENST00000630499	GRM8	O00222	908 aa		28.3	■■■□□ 2.12
SRRM2-231	ENST00000630499	KCNJ4	P48050	445 aa		28.3	■■■□□ 2.12
SRRM2-231	ENST00000630499	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.3	■■■□□ 2.12
SRRM2-231	ENST00000630499	HTT	P42858	3142 aa		28.3	■■■□□ 2.12
SRRM2-231	ENST00000630499	ZNF521	Q96K83	1311 aa		28.29	■■■□□ 2.12
SRRM2-231	ENST00000630499	TM4SF4	P48230	202 aa		28.29	■■■□□ 2.12
SRRM2-231	ENST00000630499	LDLRAD1	Q5T700	205 aa		28.29	■■■□□ 2.12
SRRM2-231	ENST00000630499	HDAC9	Q9UKV0	1011 aa		28.29	■■■□□ 2.12
SRRM2-231	ENST00000630499	KAZALD1	Q96I82	304 aa		28.28	■■■□□ 2.12
SRRM2-231	ENST00000630499	ZNF594	Q96JF6	807 aa	Predicted RBP	28.28	■■■□□ 2.12
SRRM2-231	ENST00000630499	PCDHAC2	Q9Y5I4	1007 aa		28.28	■■■□□ 2.12
SRRM2-231	ENST00000630499	ARAP2	Q8WZ64	1704 aa		28.28	■■■□□ 2.12
SRRM2-231	ENST00000630499	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.27	■■■□□ 2.12
SRRM2-231	ENST00000630499	FKBP1A	P62942	108 aa	Known RBP	28.27	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms