RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 TRIM75PA6NK02 468 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 CALML3P27482 149 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 NOD1Q9Y239 953 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 IGHDP01880 384 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 LMAN1P49257 510 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 TAF12Q16514 161 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 RGS22Q8NE09 1264 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBE3A-220ENST00000630424 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
UBE3A-220ENST00000630424 UQCRHLA0A096LP55 91 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 UQCRHP07919 91 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
UBE3A-220ENST00000630424 TMX3Q96JJ7 454 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 ZNF518AQ6AHZ1 1483 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 CCDC24Q8N4L8 307 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
UBE3A-220ENST00000630424 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
UBE3A-220ENST00000630424 DDX21Q9NR30 783 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBE3A-220ENST00000630424 PRKG1Q13976 671 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 AKNAD1Q5T1N1 836 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 SH2D4AQ9H788 454 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
UBE3A-220ENST00000630424 EIF6P56537 245 aaKnown RBP16.11■□□□□ 0.17
UBE3A-220ENST00000630424 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 PSMA7O14818 248 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 SSX2IPQ9Y2D8 614 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 NPATQ14207 1427 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 APBA3O96018 575 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 ESYT1Q9BSJ8 1104 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
UBE3A-220ENST00000630424 GOLGA6L10A0A0M3HER8 536 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 H0YIN7 160 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 HS2ST1Q7LGA3 356 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 KCNG4Q8TDN1 519 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
UBE3A-220ENST00000630424 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 GNA11P29992 359 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 NUCB1Q02818 461 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 JADE2Q9NQC1 790 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 IVNS1ABPQ9Y6Y0 642 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 HIBADHP31937 336 aaKnown RBP16.1■□□□□ 0.17
UBE3A-220ENST00000630424 BAG6P46379 1132 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 GGA1Q9UJY5 639 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 USP21Q9UK80 565 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 DENND2AQ9ULE3 1009 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 FAM13AO94988 1023 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 GCOM1H8Y6P7 765 aaPredicted RBP16.1■□□□□ 0.17
UBE3A-220ENST00000630424 MYZAPP0CAP1 466 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 GSDMDP57764 484 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 UBE2HP62256 183 aa16.1■□□□□ 0.17
UBE3A-220ENST00000630424 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
UBE3A-220ENST00000630424 MBD4O95243 580 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 ZYXQ15942 572 aaKnown RBP16.09■□□□□ 0.17
UBE3A-220ENST00000630424 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 PLVAPQ9BX97 442 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 ATP10BO94823 1461 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
UBE3A-220ENST00000630424 TIMM10P62072 90 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 DHX58Q96C10 678 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 RTL9Q8NET4 1388 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 RXRAP19793 462 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
UBE3A-220ENST00000630424 TMOD4Q9NZQ9 345 aa16.09■□□□□ 0.17
UBE3A-220ENST00000630424 STAMBPO95630 424 aa16.08■□□□□ 0.17
UBE3A-220ENST00000630424 ZSCAN22P10073 491 aaPredicted RBP16.08■□□□□ 0.17
UBE3A-220ENST00000630424 ITGA6P23229 1130 aa16.08■□□□□ 0.17
UBE3A-220ENST00000630424 FCHSD1Q86WN1 690 aa16.08■□□□□ 0.17
UBE3A-220ENST00000630424 GINS2Q9Y248 185 aa16.08■□□□□ 0.17
UBE3A-220ENST00000630424 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
UBE3A-220ENST00000630424 GRIPAP1Q4V328 841 aa16.08■□□□□ 0.16
UBE3A-220ENST00000630424 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
UBE3A-220ENST00000630424 ZKSCAN3Q9BRR0 538 aa16.08■□□□□ 0.16
UBE3A-220ENST00000630424 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
UBE3A-220ENST00000630424 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
UBE3A-220ENST00000630424 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
UBE3A-220ENST00000630424 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-220ENST00000630424 IKBKGQ9Y6K9 419 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 A1BGP04217 495 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 MCM3P25205 808 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 GJC1P36383 396 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-220ENST00000630424 ARL1P40616 181 aaPredicted RBP16.07■□□□□ 0.16
UBE3A-220ENST00000630424 ARID5AQ03989 594 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 SPAG1Q07617 926 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms