RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 LRRC24Q50LG9 513 aa25.86■■□□□ 1.73
CIRBP-246ENST00000628979 HDAC5Q9UQL6 1122 aa25.86■■□□□ 1.73
CIRBP-246ENST00000628979 USP17L3A6NCW0 530 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 USP17L4A6NCW7 530 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 RPS12P25398 132 aaKnown RBP25.85■■□□□ 1.73
CIRBP-246ENST00000628979 USP17L1Q7RTZ2 530 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 DPF2Q92785 391 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 RIPOR2Q9Y4F9 1068 aa25.85■■□□□ 1.73
CIRBP-246ENST00000628979 GNAI3P08754 354 aa25.84■■□□□ 1.73
CIRBP-246ENST00000628979 METTL24Q5JXM2 366 aa25.84■■□□□ 1.73
CIRBP-246ENST00000628979 RBM26Q5T8P6 1007 aaKnown RBP25.84■■□□□ 1.73
CIRBP-246ENST00000628979 RSBN1LQ6PCB5 846 aaPredicted RBP25.84■■□□□ 1.73
CIRBP-246ENST00000628979 CNTROBQ8N137 903 aa25.84■■□□□ 1.73
CIRBP-246ENST00000628979 ADAMTSL1Q8N6G6 1762 aa25.84■■□□□ 1.73
CIRBP-246ENST00000628979 SAMD7Q7Z3H4 446 aa25.83■■□□□ 1.73
CIRBP-246ENST00000628979 FTSJ3Q8IY81 847 aaKnown RBP25.83■■□□□ 1.73
CIRBP-246ENST00000628979 TRPM4Q8TD43 1214 aa25.83■■□□□ 1.73
CIRBP-246ENST00000628979 MROH5Q6ZUA9 1318 aa25.83■■□□□ 1.73
CIRBP-246ENST00000628979 MXD3Q9BW11 206 aa25.82■■□□□ 1.72
CIRBP-246ENST00000628979 RFX5P48382 616 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-246ENST00000628979 HIRAP54198 1017 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-246ENST00000628979 TBC1D10BQ4KMP7 808 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-246ENST00000628979 CD209Q9NNX6 404 aa25.81■■□□□ 1.72
CIRBP-246ENST00000628979 PSME4Q14997 1843 aa25.81■■□□□ 1.72
CIRBP-246ENST00000628979 ITGBL1O95965 494 aaPredicted RBP25.8■■□□□ 1.72
CIRBP-246ENST00000628979 UBE4AQ14139 1066 aa25.8■■□□□ 1.72
CIRBP-246ENST00000628979 ZNF804AQ7Z570 1209 aa25.8■■□□□ 1.72
CIRBP-246ENST00000628979 DZIP1LQ8IYY4 767 aaKnown RBP25.8■■□□□ 1.72
CIRBP-246ENST00000628979 AGBL3Q8NEM8 1001 aa25.8■■□□□ 1.72
CIRBP-246ENST00000628979 SIL1Q9H173 461 aa25.8■■□□□ 1.72
CIRBP-246ENST00000628979 IRS2Q9Y4H2 1338 aa25.8■■□□□ 1.72
CIRBP-246ENST00000628979 GTF2IP78347 998 aa25.79■■□□□ 1.72
CIRBP-246ENST00000628979 PTPN12Q05209 780 aaKnown RBP25.79■■□□□ 1.72
CIRBP-246ENST00000628979 TTLL5Q6EMB2 1281 aa25.79■■□□□ 1.72
CIRBP-246ENST00000628979 C15orf52Q6ZUT6 534 aaKnown RBP25.79■■□□□ 1.72
CIRBP-246ENST00000628979 EYA2O00167 538 aa25.78■■□□□ 1.72
CIRBP-246ENST00000628979 DACT2Q5SW24 774 aa25.78■■□□□ 1.72
CIRBP-246ENST00000628979 STRIP1Q5VSL9 837 aa25.78■■□□□ 1.72
CIRBP-246ENST00000628979 EGFRP00533 1210 aa25.77■■□□□ 1.72
CIRBP-246ENST00000628979 GNAI2P04899 355 aa25.77■■□□□ 1.72
CIRBP-246ENST00000628979 GYG1P46976 350 aa25.77■■□□□ 1.72
CIRBP-246ENST00000628979 ITPRIPQ8IWB1 547 aa25.77■■□□□ 1.72
CIRBP-246ENST00000628979 PA2G4Q9UQ80 394 aaKnown RBP25.77■■□□□ 1.72
CIRBP-246ENST00000628979 PASKQ96RG2 1323 aa25.77■■□□□ 1.72
CIRBP-246ENST00000628979 USP17L8P0C7I0 530 aa25.76■■□□□ 1.71
CIRBP-246ENST00000628979 RLBP1P12271 317 aa25.76■■□□□ 1.71
CIRBP-246ENST00000628979 GMLQ99445 158 aa25.76■■□□□ 1.71
CIRBP-246ENST00000628979 PDE8BO95263 885 aa25.75■■□□□ 1.71
CIRBP-246ENST00000628979 FMR1Q06787 632 aaKnown RBP eCLIP25.75■■□□□ 1.71
CIRBP-246ENST00000628979 KIF4BQ2VIQ3 1234 aa25.75■■□□□ 1.71
CIRBP-246ENST00000628979 YTHDC1Q96MU7 727 aaKnown RBP25.75■■□□□ 1.71
CIRBP-246ENST00000628979 JAG2Q9Y219 1238 aa25.75■■□□□ 1.71
CIRBP-246ENST00000628979 SRGAP3O43295 1099 aa25.74■■□□□ 1.71
CIRBP-246ENST00000628979 HIBADHP31937 336 aaKnown RBP25.74■■□□□ 1.71
CIRBP-246ENST00000628979 VGLL2Q8N8G2 317 aa25.74■■□□□ 1.71
CIRBP-246ENST00000628979 RCAN3Q9UKA8 241 aa25.74■■□□□ 1.71
CIRBP-246ENST00000628979 TRAF5O00463 557 aa25.73■■□□□ 1.71
CIRBP-246ENST00000628979 IL1R1P14778 569 aa25.73■■□□□ 1.71
CIRBP-246ENST00000628979 ATG9AQ7Z3C6 839 aa25.73■■□□□ 1.71
CIRBP-246ENST00000628979 VPS37DQ86XT2 251 aa25.73■■□□□ 1.71
CIRBP-246ENST00000628979 PANK1Q8TE04 598 aa25.73■■□□□ 1.71
CIRBP-246ENST00000628979 ZC3H15Q8WU90 426 aaKnown RBP25.73■■□□□ 1.71
CIRBP-246ENST00000628979 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
CIRBP-246ENST00000628979 GLIS2Q9BZE0 524 aaPredicted RBP25.73■■□□□ 1.71
CIRBP-246ENST00000628979 MYO3BQ8WXR4 1341 aa25.72■■□□□ 1.71
CIRBP-246ENST00000628979 ZNF280AP59817 542 aaPredicted RBP25.72■■□□□ 1.71
CIRBP-246ENST00000628979 DNAJC5GQ8N7S2 189 aa25.72■■□□□ 1.71
CIRBP-246ENST00000628979 MYOZ2Q9NPC6 264 aa25.72■■□□□ 1.71
CIRBP-246ENST00000628979 PGAP2Q9UHJ9 254 aa25.72■■□□□ 1.71
CIRBP-246ENST00000628979 ZNF646O15015 1829 aaPredicted RBP25.72■■□□□ 1.71
CIRBP-246ENST00000628979 TMEM88BA6NKF7 163 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 PUM3Q15397 648 aaKnown RBP25.71■■□□□ 1.71
CIRBP-246ENST00000628979 KIAA0825Q8IV33 1275 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 OGFOD1Q8N543 542 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 C1orf115Q9H7X2 142 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 CREBZFQ9NS37 354 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 CEP350Q5VT06 3117 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 ZNF609O15014 1411 aa25.71■■□□□ 1.71
CIRBP-246ENST00000628979 CIAO1O76071 339 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 IFIT1P09914 478 aaKnown RBP25.7■■□□□ 1.7
CIRBP-246ENST00000628979 CAVIN4Q5BKX8 364 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 USP48Q86UV5 1035 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 COPRSQ9NQ92 184 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 CEP126Q9P2H0 1117 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 FBXO3Q9UK99 471 aa25.7■■□□□ 1.7
CIRBP-246ENST00000628979 IQSEC3Q9UPP2 1182 aaPredicted RBP25.7■■□□□ 1.7
CIRBP-246ENST00000628979 ASTN2O75129 1339 aaPredicted RBP25.69■■□□□ 1.7
CIRBP-246ENST00000628979 IL15P40933 162 aaPredicted RBP25.69■■□□□ 1.7
CIRBP-246ENST00000628979 SCARF1Q14162 830 aa25.69■■□□□ 1.7
CIRBP-246ENST00000628979 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
CIRBP-246ENST00000628979 DCPSQ96C86 337 aaKnown RBP25.69■■□□□ 1.7
CIRBP-246ENST00000628979 POLR2AP24928 1970 aaKnown RBP25.69■■□□□ 1.7
CIRBP-246ENST00000628979 F8W031 263 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-246ENST00000628979 FRAT2O75474 233 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-246ENST00000628979 SASH1O94885 1247 aa25.68■■□□□ 1.7
CIRBP-246ENST00000628979 MS4A1P11836 297 aa25.68■■□□□ 1.7
CIRBP-246ENST00000628979 SLC5A1P13866 664 aa25.68■■□□□ 1.7
CIRBP-246ENST00000628979 BCAMP50895 628 aa25.68■■□□□ 1.7
CIRBP-246ENST00000628979 MTX1Q13505 466 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms