RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 KRT38O76015 456 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 EGFRP00533 1210 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DNAJB2P25686 324 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PSMC4P43686 418 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 C9orf50Q5SZB4 431 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 HFE2Q6ZVN8 426 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ASCL5Q7RTU5 278 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SUGP1Q8IWZ8 645 aaKnown RBP4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 IFNL2Q8IZJ0 200 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 CRISPLD2Q9H0B8 497 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ANGEL1Q9UNK9 670 aaKnown RBP4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 ZFHX4Q86UP3 3567 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 MYPNQ86TC9 1320 aa4.41□□□□□ -1.7
SCARNA4.1-201ENST00000628597 DLEC1Q9Y238 1755 aa4.4□□□□□ -1.7
SCARNA4.1-201ENST00000628597 SLX4Q8IY92 1834 aa4.4□□□□□ -1.7
SCARNA4.1-201ENST00000628597 PRR23AA6NEV1 266 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PROB1E7EW31 1015 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TCERG1O14776 1098 aaKnown RBP4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 RPS12P25398 132 aaKnown RBP4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TCF15Q12870 199 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 SCARF1Q14162 830 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NBPF20Q3BBV1 942 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 IER5LQ5T953 404 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PRAMEF18Q5VWM3 479 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ADSSL1Q8N142 457 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ANKS1AQ92625 1134 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 WNK4Q96J92 1243 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 RNPC3Q96LT9 517 aaKnown RBP4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CD320Q9NPF0 282 aa4.4□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MAP1BP46821 2468 aaKnown RBP4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PTPN13Q12923 2485 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ERVV-2B6SEH9 535 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ADCY3O60266 1144 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 INHAP05111 366 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 U2AF1L5P0DN76 240 aaPredicted RBP4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 OSBPP22059 807 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 GTF2E1P29083 439 aaPredicted RBP4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 HOXC9P31274 260 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 IRS1P35568 1242 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CABP4P57796 275 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 U2AF1Q01081 240 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 POLA2Q14181 598 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TPTE2Q6XPS3 522 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CCDC129Q6ZRS4 1044 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PRR23BQ6ZRT6 265 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TMEFF1Q8IYR6 380 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 HLA-CQ95604 372 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NFAT5O94916 1531 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TONSLQ96HA7 1378 aa4.39□□□□□ -1.71
SCARNA4.1-201ENST00000628597 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CYSRT1A8MQ03 144 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 GTPBP6O43824 516 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TLR2O60603 784 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 COL9A3Q14050 684 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ADGRE1Q14246 886 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NBPF9Q3BBW0 867 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 LDLRAD1Q5T700 205 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NKD2Q969F2 451 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PTPN18Q99952 460 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PAK6Q9NQU5 681 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 AOX1Q06278 1338 aa4.38□□□□□ -1.71
SCARNA4.1-201ENST00000628597 BCORQ6W2J9 1755 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 MAP2P11137 1827 aaKnown RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ADGRB1O14514 1584 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ZNF292O60281 2723 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 TESPA1A2RU30 521 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KLRG2A4D1S0 409 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PSMD14O00487 310 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PPP1R12BO60237 982 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CANXP27824 592 aaKnown RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KIAA0319Q5VV43 1072 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 DNAJC10Q8IXB1 793 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 RPGRQ92834 1020 aaKnown RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PBXIP1Q96AQ6 731 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ANKFY1Q9P2R3 1169 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ZNF330Q9Y3S2 320 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CACNA1HO95180 2353 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 HTTP42858 3142 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ASTN2O75129 1339 aaPredicted RBP4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ADGRA2Q96PE1 1338 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ZNF462Q96JM2 2506 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
SCARNA4.1-201ENST00000628597 FAM208AQ9UK61 1670 aaKnown RBP4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 POTEB3A0JP26 581 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 H0Y858 1186 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 ABCB7O75027 752 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 HSP90AB1P08238 724 aaKnown RBP4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PHKG2P15735 406 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 FCGRTP55899 365 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PRKCZQ05513 592 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 KIAA2012Q0VF49 1180 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 LRRC26Q2I0M4 334 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 POTEBQ6S5H4 581 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 RIC3Q7Z5B4 369 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 PODNQ7Z5L7 613 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 NME9Q86XW9 330 aa4.36□□□□□ -1.71
SCARNA4.1-201ENST00000628597 FAM178BQ8IXR5 827 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms