RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 GMLQ99445 158 aa24.42■■□□□ 1.5
ATG4B-226ENST00000625810 USP17L3A6NCW0 530 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 USP17L4A6NCW7 530 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 F6X3S4 739 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 CASP7P55210 303 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 FAM161AQ3B820 660 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 USP17L1Q7RTZ2 530 aa24.41■■□□□ 1.5
ATG4B-226ENST00000625810 GBA2Q9HCG7 927 aaPredicted RBP24.41■■□□□ 1.5
ATG4B-226ENST00000625810 CSF1RP07333 972 aa24.4■■□□□ 1.5
ATG4B-226ENST00000625810 SULF1Q8IWU6 871 aa24.4■■□□□ 1.5
ATG4B-226ENST00000625810 ZIC5Q96T25 663 aa24.4■■□□□ 1.5
ATG4B-226ENST00000625810 LEMD3Q9Y2U8 911 aa24.4■■□□□ 1.5
ATG4B-226ENST00000625810 CA12O43570 354 aa24.39■■□□□ 1.49
ATG4B-226ENST00000625810 NOGQ13253 232 aa24.39■■□□□ 1.49
ATG4B-226ENST00000625810 ABHD8Q96I13 439 aa24.39■■□□□ 1.49
ATG4B-226ENST00000625810 ANKRD2Q9GZV1 360 aa24.39■■□□□ 1.49
ATG4B-226ENST00000625810 ZNF646O15015 1829 aaPredicted RBP24.39■■□□□ 1.49
ATG4B-226ENST00000625810 ANKRD18BA2A2Z9 1011 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 USP17L8P0C7I0 530 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 SCARF1Q14162 830 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 BEND3Q5T5X7 828 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 ANGEL2Q5VTE6 544 aaKnown RBP24.38■■□□□ 1.49
ATG4B-226ENST00000625810 RGMBQ6NW40 437 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 C2orf69Q8N8R5 385 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 FBXW7Q969H0 707 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 MYOZ2Q9NPC6 264 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 CHMP3Q9Y3E7 222 aa24.38■■□□□ 1.49
ATG4B-226ENST00000625810 FAM155AB1AL88 458 aaPredicted RBP24.37■■□□□ 1.49
ATG4B-226ENST00000625810 KCNJ4P48050 445 aa24.37■■□□□ 1.49
ATG4B-226ENST00000625810 CDCA5Q96FF9 252 aa24.37■■□□□ 1.49
ATG4B-226ENST00000625810 COA1Q9GZY4 146 aa24.37■■□□□ 1.49
ATG4B-226ENST00000625810 ZNF804BA4D1E1 1349 aa24.36■■□□□ 1.49
ATG4B-226ENST00000625810 IFIT5Q13325 482 aaKnown RBP24.35■■□□□ 1.49
ATG4B-226ENST00000625810 DACT2Q5SW24 774 aa24.35■■□□□ 1.49
ATG4B-226ENST00000625810 TXNRD3Q86VQ6 643 aa24.35■■□□□ 1.49
ATG4B-226ENST00000625810 MXD3Q9BW11 206 aa24.35■■□□□ 1.49
ATG4B-226ENST00000625810 CHRNDQ07001 517 aa24.34■■□□□ 1.49
ATG4B-226ENST00000625810 SLC4A10Q6U841 1118 aa24.34■■□□□ 1.49
ATG4B-226ENST00000625810 C9orf78Q9NZ63 289 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-226ENST00000625810 PITPNM2Q9BZ72 1349 aa24.34■■□□□ 1.49
ATG4B-226ENST00000625810 KLRK1P26718 216 aa24.33■■□□□ 1.49
ATG4B-226ENST00000625810 FOXO4P98177 505 aa24.33■■□□□ 1.49
ATG4B-226ENST00000625810 GRM8O00222 908 aa24.32■■□□□ 1.48
ATG4B-226ENST00000625810 ZNF157P51786 506 aaPredicted RBP24.32■■□□□ 1.48
ATG4B-226ENST00000625810 STRIP1Q5VSL9 837 aa24.32■■□□□ 1.48
ATG4B-226ENST00000625810 OGFOD1Q8N543 542 aa24.32■■□□□ 1.48
ATG4B-226ENST00000625810 CCDC102AQ96A19 550 aa24.32■■□□□ 1.48
ATG4B-226ENST00000625810 LMBR1LQ6UX01 489 aa24.31■■□□□ 1.48
ATG4B-226ENST00000625810 MYO3BQ8WXR4 1341 aa24.31■■□□□ 1.48
ATG4B-226ENST00000625810 ALDH1L1O75891 902 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 SLC10A3P09131 477 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 CCDC57Q2TAC2 916 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 NBPF9Q3BBW0 867 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 TAF7LQ5H9L4 462 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 TTLL5Q6EMB2 1281 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 SRCIN1Q9C0H9 1055 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 SCAF8Q9UPN6 1271 aaKnown RBP24.3■■□□□ 1.48
ATG4B-226ENST00000625810 ZNF521Q96K83 1311 aa24.3■■□□□ 1.48
ATG4B-226ENST00000625810 PAPPA2Q9BXP8 1791 aa24.29■■□□□ 1.48
ATG4B-226ENST00000625810 TAF5LO75529 589 aa24.29■■□□□ 1.48
ATG4B-226ENST00000625810 KIF23Q02241 960 aaPredicted RBP24.29■■□□□ 1.48
ATG4B-226ENST00000625810 HELBQ8NG08 1087 aaPredicted RBP24.29■■□□□ 1.48
ATG4B-226ENST00000625810 EPHA10Q5JZY3 1008 aa24.28■■□□□ 1.48
ATG4B-226ENST00000625810 FKBP1BP68106 108 aa24.27■■□□□ 1.48
ATG4B-226ENST00000625810 GTF2IP78347 998 aa24.27■■□□□ 1.48
ATG4B-226ENST00000625810 RASAL3Q86YV0 1011 aa24.27■■□□□ 1.48
ATG4B-226ENST00000625810 IRS2Q9Y4H2 1338 aa24.27■■□□□ 1.48
ATG4B-226ENST00000625810 CASP8AP2Q9UKL3 1982 aa24.27■■□□□ 1.48
ATG4B-226ENST00000625810 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 SNAP23O00161 211 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 WNT10BO00744 389 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 LDHAL6AQ6ZMR3 332 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 ZNF594Q96JF6 807 aaPredicted RBP24.26■■□□□ 1.47
ATG4B-226ENST00000625810 CD209Q9NNX6 404 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 CNNM1Q9NRU3 951 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 SAGE1Q9NXZ1 904 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 HDAC9Q9UKV0 1011 aa24.26■■□□□ 1.47
ATG4B-226ENST00000625810 E9PSI1 815 aa24.25■■□□□ 1.47
ATG4B-226ENST00000625810 PLIN1O60240 522 aa24.25■■□□□ 1.47
ATG4B-226ENST00000625810 MMP14P50281 582 aa24.25■■□□□ 1.47
ATG4B-226ENST00000625810 MCOLN1Q9GZU1 580 aa24.25■■□□□ 1.47
ATG4B-226ENST00000625810 SASH1O94885 1247 aa24.24■■□□□ 1.47
ATG4B-226ENST00000625810 PRAMEF18Q5VWM3 479 aa24.24■■□□□ 1.47
ATG4B-226ENST00000625810 MOB2Q70IA6 237 aa24.24■■□□□ 1.47
ATG4B-226ENST00000625810 KIAA0825Q8IV33 1275 aa24.24■■□□□ 1.47
ATG4B-226ENST00000625810 CCDC85CA6NKD9 419 aa24.23■■□□□ 1.47
ATG4B-226ENST00000625810 C15orf52Q6ZUT6 534 aaKnown RBP24.23■■□□□ 1.47
ATG4B-226ENST00000625810 ZNF804AQ7Z570 1209 aa24.23■■□□□ 1.47
ATG4B-226ENST00000625810 MRPL50Q8N5N7 158 aaKnown RBP24.23■■□□□ 1.47
ATG4B-226ENST00000625810 CSRNP1Q96S65 589 aa24.23■■□□□ 1.47
ATG4B-226ENST00000625810 RNF186Q9NXI6 227 aa24.23■■□□□ 1.47
ATG4B-226ENST00000625810 SUCLG2Q96I99 432 aa24.22■■□□□ 1.47
ATG4B-226ENST00000625810 ZBED3Q96IU2 234 aaPredicted RBP24.21■■□□□ 1.47
ATG4B-226ENST00000625810 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
ATG4B-226ENST00000625810 TRPA1O75762 1119 aa24.2■■□□□ 1.46
ATG4B-226ENST00000625810 NBPF7P0C2Y1 421 aaPredicted RBP24.2■■□□□ 1.46
ATG4B-226ENST00000625810 DGKZQ13574 1117 aa24.2■■□□□ 1.46
ATG4B-226ENST00000625810 CERS5Q8N5B7 392 aa24.2■■□□□ 1.46
ATG4B-226ENST00000625810 PTPRCP08575 1304 aa24.19■■□□□ 1.46
ATG4B-226ENST00000625810 NF2P35240 595 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms