RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZAP70P43403 619 aa23.45■■□□□ 1.35
PCDHB11-202ENST00000624887 PARP10Q53GL7 1025 aa23.45■■□□□ 1.35
PCDHB11-202ENST00000624887 OSBP2Q969R2 916 aa23.45■■□□□ 1.35
PCDHB11-202ENST00000624887 TCHHQ07283 1943 aa23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 HMGB1P09429 215 aaKnown RBP23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 UTP14AQ9BVJ6 771 aaKnown RBP23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 TRPC5Q9UL62 973 aaPredicted RBP23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 ATP6V1DQ9Y5K8 247 aa23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 ATRNO75882 1429 aa23.45■■□□□ 1.34
PCDHB11-202ENST00000624887 AKAP11Q9UKA4 1901 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 M0R2C6 588 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 KCNQ2O43526 872 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 TMEM87AQ8NBN3 555 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 MTMR6Q9Y217 621 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 COL5A3P25940 1745 aaPredicted RBP23.44■■□□□ 1.34
PCDHB11-202ENST00000624887 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 FOXD4L6Q3SYB3 417 aaPredicted RBP23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 FOXD4L3Q6VB84 417 aaPredicted RBP23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 STOX1Q6ZVD7 989 aa23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 MYH7P12883 1935 aa23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 MROH5Q6ZUA9 1318 aa23.43■■□□□ 1.34
PCDHB11-202ENST00000624887 HCLS1P14317 486 aaPredicted RBP23.42■■□□□ 1.34
PCDHB11-202ENST00000624887 MCAMP43121 646 aa23.42■■□□□ 1.34
PCDHB11-202ENST00000624887 Q6ZUG5 572 aa23.42■■□□□ 1.34
PCDHB11-202ENST00000624887 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
PCDHB11-202ENST00000624887 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 APPBP2Q92624 585 aa23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 TMEM63CQ9P1W3 806 aa23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 RBM27Q9P2N5 1060 aaKnown RBP23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 DDX60Q8IY21 1712 aaKnown RBP23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 PI16Q6UXB8 463 aa23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 DHX32Q7L7V1 743 aaKnown RBP23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 GDPD2Q9HCC8 539 aa23.41■■□□□ 1.34
PCDHB11-202ENST00000624887 HSP90B1P14625 803 aaKnown RBP23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 PDCP20941 246 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 WASHC4Q2M389 1173 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 ARAP2Q8WZ64 1704 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 FGFR2P21802 821 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 LARP1BQ659C4 914 aaKnown RBP23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 LPIN2Q92539 896 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 NIP7Q9Y221 180 aaKnown RBP eCLIP23.4■■□□□ 1.34
PCDHB11-202ENST00000624887 LAMB2P55268 1798 aa23.39■■□□□ 1.34
PCDHB11-202ENST00000624887 BCORQ6W2J9 1755 aa23.39■■□□□ 1.33
PCDHB11-202ENST00000624887 DTNBO60941 627 aa23.39■■□□□ 1.33
PCDHB11-202ENST00000624887 NTSR2O95665 410 aa23.39■■□□□ 1.33
PCDHB11-202ENST00000624887 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.39■■□□□ 1.33
PCDHB11-202ENST00000624887 FAM177BA6PVY3 158 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 E7EWF7 191 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 PRKCSHP14314 528 aaPredicted RBP23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 ARID4AP29374 1257 aaPredicted RBP23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 TTF1Q15361 905 aaPredicted RBP23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 CTNNA3Q9UI47 895 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 CNPY2Q9Y2B0 182 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 RTL9Q8NET4 1388 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 STK3Q13188 491 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 CCDC102BQ68D86 513 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 ZSCAN25Q6NSZ9 544 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
PCDHB11-202ENST00000624887 VPS37CA5D8V6 355 aaPredicted RBP23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 FOXP2O15409 715 aa23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 GADD45BO75293 160 aaPredicted RBP23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 UQCRFS1P1P0C7P4 283 aa23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 PUS7LQ9H0K6 701 aaKnown RBP23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
PCDHB11-202ENST00000624887 A0A0G2JLW4 131 aa23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 BRF1Q92994 677 aa23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 MPHOSPH8Q99549 860 aa23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 RTN4Q9NQC3 1192 aaKnown RBP23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 PHKA1P46020 1223 aa23.36■■□□□ 1.33
PCDHB11-202ENST00000624887 ADD2P35612 726 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 FGD1P98174 961 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 TTLL5Q6EMB2 1281 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 LINC00116Q8NCU8 138 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 HELBQ8NG08 1087 aaPredicted RBP23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 SYAP1Q96A49 352 aaPredicted RBP23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 LRRC2Q9BYS8 371 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
PCDHB11-202ENST00000624887 SLC5A1P13866 664 aa23.34■■□□□ 1.33
PCDHB11-202ENST00000624887 SEPT12Q8IYM1 358 aa23.34■■□□□ 1.33
PCDHB11-202ENST00000624887 CSPP1Q1MSJ5 1256 aa23.34■■□□□ 1.33
PCDHB11-202ENST00000624887 LRSAM1Q6UWE0 723 aa23.34■■□□□ 1.33
PCDHB11-202ENST00000624887 GPAA1O43292 621 aa23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 PFKFB2O60825 505 aa23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 FGAP02671 866 aa23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 NASPP49321 788 aaPredicted RBP23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 DNM1Q05193 864 aaKnown RBP23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 IMMTQ16891 758 aaKnown RBP23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 PIH1D3Q9NQM4 214 aaKnown RBP23.33■■□□□ 1.33
PCDHB11-202ENST00000624887 IGHMBP2P38935 993 aaKnown RBP23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 UBE2HP62256 183 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 UBE3CQ15386 1083 aa23.32■■□□□ 1.32
PCDHB11-202ENST00000624887 FAM182BQ5T319 152 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms