RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 HELLSQ9NRZ9 838 aa25.8■■□□□ 1.72
SPAST-204ENST00000621856 HSP90AA1P07900 732 aaKnown RBP25.79■■□□□ 1.72
SPAST-204ENST00000621856 RPS8P62241 208 aaKnown RBP25.79■■□□□ 1.72
SPAST-204ENST00000621856 SEC62Q99442 399 aaKnown RBP25.79■■□□□ 1.72
SPAST-204ENST00000621856 SERPINB2P05120 415 aa25.78■■□□□ 1.72
SPAST-204ENST00000621856 PRR5LQ6MZQ0 368 aa25.78■■□□□ 1.72
SPAST-204ENST00000621856 CCDC129Q6ZRS4 1044 aa25.78■■□□□ 1.72
SPAST-204ENST00000621856 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
SPAST-204ENST00000621856 MYH7P12883 1935 aa25.78■■□□□ 1.72
SPAST-204ENST00000621856 TM4SF1P30408 202 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 ST5P78524 1137 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 ZMYM1Q5SVZ6 1142 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 RASEFQ8IZ41 740 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 MINPP1Q9UNW1 487 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 ZFYP08048 801 aaPredicted RBP25.77■■□□□ 1.72
SPAST-204ENST00000621856 NECTIN1Q15223 517 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 TTF1Q15361 905 aaPredicted RBP25.77■■□□□ 1.72
SPAST-204ENST00000621856 RGPD3A6NKT7 1758 aaPredicted RBP25.77■■□□□ 1.72
SPAST-204ENST00000621856 RGPD4Q7Z3J3 1758 aa25.77■■□□□ 1.72
SPAST-204ENST00000621856 SLFNL1Q499Z3 407 aa25.76■■□□□ 1.71
SPAST-204ENST00000621856 ZKSCAN1P17029 563 aaPredicted RBP25.75■■□□□ 1.71
SPAST-204ENST00000621856 CREB3L3Q68CJ9 461 aa25.75■■□□□ 1.71
SPAST-204ENST00000621856 UPF3BQ9BZI7 483 aaKnown RBP25.75■■□□□ 1.71
SPAST-204ENST00000621856 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.75■■□□□ 1.71
SPAST-204ENST00000621856 UBE4AQ14139 1066 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 RNF20Q5VTR2 975 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 KCNB2Q92953 911 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 CYP2E1P05181 493 aaPredicted RBP25.74■■□□□ 1.71
SPAST-204ENST00000621856 MCM2P49736 904 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 IL27Q8NEV9 243 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 FLAD1Q8NFF5 587 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 HMG20BQ9P0W2 317 aa25.74■■□□□ 1.71
SPAST-204ENST00000621856 SLC27A2O14975 620 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 BCAMP50895 628 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 DDR1Q08345 913 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 WASHC4Q2M389 1173 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 ZSCAN25Q6NSZ9 544 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 COL23A1Q86Y22 540 aaPredicted RBP25.73■■□□□ 1.71
SPAST-204ENST00000621856 SPATA5Q8NB90 893 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 ANKRD2Q9GZV1 360 aa25.73■■□□□ 1.71
SPAST-204ENST00000621856 RPGRQ92834 1020 aaKnown RBP25.72■■□□□ 1.71
SPAST-204ENST00000621856 FOXD4L1Q9NU39 408 aa25.72■■□□□ 1.71
SPAST-204ENST00000621856 U3KPZ7 1027 aaPredicted RBP25.72■■□□□ 1.71
SPAST-204ENST00000621856 MAST3O60307 1309 aa25.72■■□□□ 1.71
SPAST-204ENST00000621856 POLRMTO00411 1230 aaKnown RBP25.71■■□□□ 1.71
SPAST-204ENST00000621856 RASGRF1Q13972 1273 aa25.71■■□□□ 1.71
SPAST-204ENST00000621856 PIH1D3Q9NQM4 214 aaKnown RBP25.71■■□□□ 1.71
SPAST-204ENST00000621856 GRAPQ13588 217 aa25.71■■□□□ 1.71
SPAST-204ENST00000621856 NBR1Q14596 966 aa25.71■■□□□ 1.71
SPAST-204ENST00000621856 GRAPLQ8TC17 118 aaPredicted RBP25.71■■□□□ 1.71
SPAST-204ENST00000621856 JAKMIP1Q96N16 626 aaKnown RBP25.71■■□□□ 1.71
SPAST-204ENST00000621856 CHMP5Q9NZZ3 219 aa25.71■■□□□ 1.71
SPAST-204ENST00000621856 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.71
SPAST-204ENST00000621856 M0R2C6 588 aa25.7■■□□□ 1.7
SPAST-204ENST00000621856 NLGN1Q8N2Q7 840 aa25.7■■□□□ 1.7
SPAST-204ENST00000621856 APPBP2Q92624 585 aa25.7■■□□□ 1.7
SPAST-204ENST00000621856 IDH1O75874 414 aaKnown RBP25.69■■□□□ 1.7
SPAST-204ENST00000621856 CASTP20810 708 aaKnown RBP25.69■■□□□ 1.7
SPAST-204ENST00000621856 OSBP2Q969R2 916 aa25.69■■□□□ 1.7
SPAST-204ENST00000621856 GNL3LQ9NVN8 582 aaKnown RBP25.69■■□□□ 1.7
SPAST-204ENST00000621856 CAVIN4Q5BKX8 364 aa25.68■■□□□ 1.7
SPAST-204ENST00000621856 TM6SF1Q9BZW5 370 aa25.68■■□□□ 1.7
SPAST-204ENST00000621856 GYG1P46976 350 aa25.68■■□□□ 1.7
SPAST-204ENST00000621856 NOL8Q76FK4 1167 aaKnown RBP25.68■■□□□ 1.7
SPAST-204ENST00000621856 DSCC1Q9BVC3 393 aa25.68■■□□□ 1.7
SPAST-204ENST00000621856 ADD2P35612 726 aa25.67■■□□□ 1.7
SPAST-204ENST00000621856 ADCK5Q3MIX3 580 aa25.67■■□□□ 1.7
SPAST-204ENST00000621856 SLC9C2Q5TAH2 1124 aa25.67■■□□□ 1.7
SPAST-204ENST00000621856 VPS37DQ86XT2 251 aa25.67■■□□□ 1.7
SPAST-204ENST00000621856 DOCK2Q92608 1830 aa25.66■■□□□ 1.7
SPAST-204ENST00000621856 PSMA5P28066 241 aa25.66■■□□□ 1.7
SPAST-204ENST00000621856 RBM17Q96I25 401 aaKnown RBP25.66■■□□□ 1.7
SPAST-204ENST00000621856 CYP46A1Q9Y6A2 500 aa25.66■■□□□ 1.7
SPAST-204ENST00000621856 WTIPA6NIX2 430 aaPredicted RBP25.66■■□□□ 1.7
SPAST-204ENST00000621856 CRY2Q49AN0 593 aa25.66■■□□□ 1.7
SPAST-204ENST00000621856 VPS53Q5VIR6 699 aa25.66■■□□□ 1.7
SPAST-204ENST00000621856 ZNF804BA4D1E1 1349 aa25.65■■□□□ 1.7
SPAST-204ENST00000621856 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
SPAST-204ENST00000621856 HSPD1P10809 573 aaKnown RBP25.65■■□□□ 1.7
SPAST-204ENST00000621856 TMX3Q96JJ7 454 aa25.65■■□□□ 1.7
SPAST-204ENST00000621856 ZSWIM6Q9HCJ5 1215 aa25.65■■□□□ 1.7
SPAST-204ENST00000621856 CPA1P15085 419 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 DDIT3P35638 169 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 EN1Q05925 392 aaPredicted RBP25.64■■□□□ 1.7
SPAST-204ENST00000621856 MAP3K12Q12852 859 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 KRT32Q14532 448 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 UBE3CQ15386 1083 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 EZH2Q15910 746 aaKnown RBP25.64■■□□□ 1.7
SPAST-204ENST00000621856 TTC14Q96N46 770 aa25.64■■□□□ 1.7
SPAST-204ENST00000621856 IQSEC3Q9UPP2 1182 aaPredicted RBP25.64■■□□□ 1.7
SPAST-204ENST00000621856 PDE6AP16499 860 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 RPAP1Q9BWH6 1393 aaPredicted RBP25.63■■□□□ 1.69
SPAST-204ENST00000621856 PUS7LQ9H0K6 701 aaKnown RBP25.63■■□□□ 1.69
SPAST-204ENST00000621856 PDRG1Q9NUG6 133 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 CIZ1Q9ULV3 898 aaPredicted RBP25.63■■□□□ 1.69
SPAST-204ENST00000621856 ZNF532Q9HCE3 1301 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 TSGA10IPQ3SY00 556 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 RUFY3Q7L099 469 aa25.63■■□□□ 1.69
SPAST-204ENST00000621856 FAM84BQ96KN1 310 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms