RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CALCOCO1Q9P1Z2 691 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 TECPR2O15040 1411 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 GOLGA8BA8MQT2 603 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 INTS4Q96HW7 963 aaKnown RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 SASH1O94885 1247 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 TPD52L1Q16890 204 aaPredicted RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 HSP90B2PQ58FF3 399 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
GGA3-222ENST00000621217 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 ZDHHC9Q9Y397 364 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
GGA3-222ENST00000621217 MARCH6O60337 910 aa10.58□□□□□ -0.71
GGA3-222ENST00000621217 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.717e-7■■□□□ 12.1
GGA3-222ENST00000621217 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.71
GGA3-222ENST00000621217 GREM2Q9H772 168 aa10.58□□□□□ -0.71
GGA3-222ENST00000621217 CCDC112Q8NEF3 446 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 TPCN1Q9ULQ1 816 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 ADORA1P30542 326 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 SART3Q15020 963 aaKnown RBP10.58□□□□□ -0.72
GGA3-222ENST00000621217 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■□□□□ 11
GGA3-222ENST00000621217 FER1L4A9Z1Z3 1794 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 KDRP35968 1356 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 NBPF14Q5TI25 921 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
GGA3-222ENST00000621217 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
GGA3-222ENST00000621217 ZSCAN29Q8IWY8 852 aaPredicted RBP10.58□□□□□ -0.72
GGA3-222ENST00000621217 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 ACBD3Q9H3P7 528 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 CTNNA3Q9UI47 895 aa10.58□□□□□ -0.72
GGA3-222ENST00000621217 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
GGA3-222ENST00000621217 CCDC69A6NI79 296 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 ZAP70P43403 619 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
GGA3-222ENST00000621217 UBAC1Q9BSL1 405 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 SCAND2PQ9GZW5 306 aaPredicted RBP10.57□□□□□ -0.72
GGA3-222ENST00000621217 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 CFAP45Q9UL16 551 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 CRKLP46109 303 aaKnown RBP10.57□□□□□ -0.72
GGA3-222ENST00000621217 SF3B2Q13435 895 aaKnown RBP10.57□□□□□ -0.72
GGA3-222ENST00000621217 HSP90AA4PQ58FG1 418 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 LEKR1Q6ZMV7 388 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 LUZP1Q86V48 1076 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 DEF6Q9H4E7 631 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 KLF18A0A0U1RQI7 1052 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 MCM5P33992 734 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 C8orf76Q96K31 380 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
GGA3-222ENST00000621217 ZKSCAN3Q9BRR0 538 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 DNAJC25Q9H1X3 360 aa10.57□□□□□ -0.72
GGA3-222ENST00000621217 RIMBP2O15034 1052 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 CYP7A1P22680 504 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 ANO6Q4KMQ2 910 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 MAGEB6Q8N7X4 407 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 FSIP1Q8NA03 581 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 IKQ13123 557 aaPredicted RBP10.56□□□□□ -0.72
GGA3-222ENST00000621217 ATG3Q9NT62 314 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
GGA3-222ENST00000621217 A0A087WWV3 80 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 IFIT3O14879 490 aaKnown RBP10.56□□□□□ -0.72
GGA3-222ENST00000621217 USP5P45974 858 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 ZNF165P49910 485 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
GGA3-222ENST00000621217 SMAP1Q8IYB5 467 aaPredicted RBP10.56□□□□□ -0.72
GGA3-222ENST00000621217 FAM177A1Q8N128 213 aaPredicted RBP10.56□□□□□ -0.72
GGA3-222ENST00000621217 PDILTQ8N807 584 aa10.56□□□□□ -0.72
GGA3-222ENST00000621217 RPS6KB1P23443 525 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 ZNF445P59923 1031 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 MSL1Q68DK7 614 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 C16orf45Q96MC5 204 aaPredicted RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 GTPBP4Q9BZE4 634 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 HEG1Q9ULI3 1381 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 MARCKSP29966 332 aaPredicted RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 POLA2Q14181 598 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 RDXP35241 583 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
GGA3-222ENST00000621217 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
GGA3-222ENST00000621217 ADCY9O60503 1353 aa10.54□□□□□ -0.72
GGA3-222ENST00000621217 PTPDC1A2A3K4 754 aa10.54□□□□□ -0.72
GGA3-222ENST00000621217 PRDM1O75626 825 aa10.54□□□□□ -0.72
GGA3-222ENST00000621217 TRIM37O94972 964 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms