RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 TRAF5O00463 557 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 HSP90B1P14625 803 aaKnown RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 LMOD1P29536 600 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 PTPN12Q05209 780 aaKnown RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 AACSQ86V21 672 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 CRAMP1Q96RY5 1269 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 XDHP47989 1333 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 CASZ1Q86V15 1759 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 ZBTB7BO15156 539 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 CHGBP05060 677 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 CENPBP07199 599 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 SLURP2P0DP57 97 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 PHKA1P46020 1223 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 TTLL12Q14166 644 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 SLC10A5Q5PT55 438 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 ANKRD45Q5TZF3 282 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 MICALL2Q8IY33 904 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 PCDHB15Q9Y5E8 787 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 A0A0C4DFX4 3053 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 DNAH12Q6ZR08 3092 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 RGS3P49796 1198 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 TCP10Q12799 353 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 DIXDC1Q155Q3 683 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 SP8Q8IXZ3 490 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 DBNDD2Q9BQY9 259 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 BSDC1Q9NW68 430 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 DDX19BQ9UMR2 479 aa5.7□□□□□ -1.5
SYCP1-210ENST00000618516 AFDNP55196 1824 aaKnown RBP5.7□□□□□ -1.5
SYCP1-210ENST00000618516 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 A0A1B0GUL7 405 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 EYA2O00167 538 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 IDH1O75874 414 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 GRIK5Q16478 980 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 CAVIN4Q5BKX8 364 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 MFSD14BQ5SR56 506 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 INTS3Q68E01 1043 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 CIAPIN1Q6FI81 312 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 OTUD7AQ8TE49 926 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 TNRC6CQ9HCJ0 1690 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 HOXA10P31260 410 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 SAMD1Q6SPF0 538 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 TRPM4Q8TD43 1214 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 MKRN1Q9UHC7 482 aaKnown RBP5.69□□□□□ -1.5
SYCP1-210ENST00000618516 TAOK2Q9UL54 1235 aa5.69□□□□□ -1.5
SYCP1-210ENST00000618516 RANBP2P49792 3224 aaKnown RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 LAMA3Q16787 3333 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 IFIT1P09914 478 aaKnown RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 PRDX5P30044 214 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 PICALMQ13492 652 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 NBPF9Q3BBW0 867 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 OGFOD1Q8N543 542 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 EYA3Q99504 573 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 GLIS2Q9BZE0 524 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 ZNRF3Q9ULT6 936 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 GLTPD2A6NH11 291 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 TCP10L2B9ZVM9 353 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 PDE8BO95263 885 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 CSF1RP07333 972 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 IFIT2P09913 472 aaKnown RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 VEGFAP15692 232 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 SCARF1Q14162 830 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 ZSCAN29Q8IWY8 852 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 CD209Q9NNX6 404 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 RAI14Q9P0K7 980 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 ABT1Q9ULW3 272 aaKnown RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 TTF2Q9UNY4 1162 aaKnown RBP5.68□□□□□ -1.5
SYCP1-210ENST00000618516 KDM2BQ8NHM5 1336 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 CDHR2Q9BYE9 1310 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 CEP290O15078 2479 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 EPHX2P34913 555 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 KIAA2012Q0VF49 1180 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 MOB2Q70IA6 237 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 MIGA1Q8NAN2 632 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 XAGE2Q96GT9 111 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 LRP2BPQ9P2M1 347 aa5.68□□□□□ -1.5
SYCP1-210ENST00000618516 ADM5C9JUS6 153 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 H7C1D1 291 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 SLC5A1P13866 664 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ATG9AQ7Z3C6 839 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ZNF804AQ7Z570 1209 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 FAM84BQ96KN1 310 aaPredicted RBP5.67□□□□□ -1.5
SYCP1-210ENST00000618516 RIPOR2Q9Y4F9 1068 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 HTTP42858 3142 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 AOX1Q06278 1338 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 KLRG2A4D1S0 409 aaPredicted RBP5.67□□□□□ -1.5
SYCP1-210ENST00000618516 RAD21O60216 631 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ATP2B4P23634 1241 aa5.67□□□□□ -1.5
SYCP1-210ENST00000618516 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
SYCP1-210ENST00000618516 ARHGAP45Q92619 1136 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms