RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 NMIQ13287 307 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 ZC3H12AQ5D1E8 599 aaKnown RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 LRP10Q7Z4F1 713 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 CCDC91Q7Z6B0 441 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 CCDC24Q8N4L8 307 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 HELBQ8NG08 1087 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 KIF18AQ8NI77 898 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 DBNLQ9UJU6 430 aaKnown RBP6.53□□□□□ -1.36
CPNE4-214ENST00000617767 ZBTB1Q9Y2K1 713 aa6.53□□□□□ -1.36
CPNE4-214ENST00000617767 A0A0D9SFI3 127 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 GLRX3O76003 335 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 ATP2B1P20020 1258 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 PTPN12Q05209 780 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 FAM98CQ17RN3 349 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 ADCK5Q3MIX3 580 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 HSP90AB4PQ58FF6 505 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 PLBD2Q8NHP8 589 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 PIBF1Q8WXW3 757 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 TMX3Q96JJ7 454 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CWC25Q9NXE8 425 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 SIPA1L3O60292 1781 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 FOSBP53539 338 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 STK3Q13188 491 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CAVIN1Q6NZI2 390 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 BICDL1Q6ZP65 573 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 NEK11Q8NG66 645 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 ITFG2Q969R8 447 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 SNX21Q969T3 373 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 SLC4A9Q96Q91 983 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CPDO75976 1380 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CCT2P78371 535 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CHAF1AQ13111 956 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 NAA30Q147X3 362 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 PI16Q6UXB8 463 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 PTF1AQ7RTS3 328 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 ZNF589Q86UQ0 364 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 JAKMIP1Q96N16 626 aaKnown RBP6.52□□□□□ -1.37
CPNE4-214ENST00000617767 STAP2Q9UGK3 403 aa6.52□□□□□ -1.37
CPNE4-214ENST00000617767 CRYBG1Q9Y4K1 1723 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 GORABQ5T7V8 394 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 TTC19Q6DKK2 380 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-214ENST00000617767 NECAB1Q8N987 351 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 RNF214Q8ND24 703 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 PXDNLA1KZ92 1463 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 ERVV-2B6SEH9 535 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 UBAP1LF5GYI3 381 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 H0YHG0 523 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 SGSM2O43147 1006 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 ATP6V1AP38606 617 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 SARNPP82979 210 aaKnown RBP6.51□□□□□ -1.37
CPNE4-214ENST00000617767 CC2D2BQ6DHV5 1058 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 KIF6Q6ZMV9 814 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 GOLGA6L1Q8N7Z2 621 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 TCHHQ07283 1943 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 CTIFO43310 598 aaKnown RBP6.51□□□□□ -1.37
CPNE4-214ENST00000617767 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-214ENST00000617767 ZNF445P59923 1031 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 DDB1Q16531 1140 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 ZSCAN23Q3MJ62 389 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 MAP9Q49MG5 647 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 TNNI3KQ59H18 835 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 KRBA2Q6ZNG9 492 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 STK11IPQ8N1F8 1099 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 SNX14Q9Y5W7 946 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 RPS6KL1Q9Y6S9 549 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 FPGT-TNNI3KV9GXZ4 949 aa6.51□□□□□ -1.37
CPNE4-214ENST00000617767 A0A0G2JLW4 131 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 A0A1B0GUL7 405 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 KDM4AO75164 1064 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 PRPF40AO75400 957 aaKnown RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 ADORA1P30542 326 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 CCDC96Q2M329 555 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 KLHL40Q2TBA0 621 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 TTC31Q49AM3 519 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 PACS2Q86VP3 889 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 ERC1Q8IUD2 1116 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 TTC12Q9H892 705 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 LARGE1O95461 756 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 STARD3NLO95772 234 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 MAP2K2P36507 400 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 GSCP56915 257 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 FOXO4P98177 505 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 CCDC57Q2TAC2 916 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 TMTC2Q8N394 836 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 JMYQ8N9B5 988 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 CCDC191Q8NCU4 936 aa6.5□□□□□ -1.37
CPNE4-214ENST00000617767 TRMT112Q9UI30 125 aaKnown RBP6.5□□□□□ -1.37
CPNE4-214ENST00000617767 MTX1Q13505 466 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 CCDC83Q8IWF9 413 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 LSG1Q9H089 658 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms