RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 ZNF131P52739 623 aa6.79□□□□□ -1.32
RFX3-212ENST00000617270 SP4Q02446 784 aa6.79□□□□□ -1.32
RFX3-212ENST00000617270 SPAG1Q07617 926 aa6.79□□□□□ -1.32
RFX3-212ENST00000617270 RAPGEF1Q13905 1077 aa6.79□□□□□ -1.32
RFX3-212ENST00000617270 LEO1Q8WVC0 666 aaPredicted RBP6.79□□□□□ -1.32
RFX3-212ENST00000617270 F8W031 263 aaPredicted RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 GAS8O95995 478 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 ZNF853P0CG23 659 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 WTAPQ15007 396 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 PRPF31Q8WWY3 499 aaKnown RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 EVI5LQ96CN4 794 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 DNAJC25Q9H1X3 360 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 NBPF7P0C2Y1 421 aaPredicted RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 KRT83P78385 493 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 LMNTD2Q8IXW0 634 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 BRF1Q92994 677 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 ZNF692Q9BU19 519 aaPredicted RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 SWAP70Q9UH65 585 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 NAPAP54920 295 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 GABPAQ06546 454 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 LRRC43Q8N309 656 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 NEK11Q8NG66 645 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 DHX58Q96C10 678 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 PICALMQ13492 652 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 MRPS27Q92552 414 aaKnown RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 NEK1Q96PY6 1258 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 A0A1B0GUA9 196 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 TNNC1P63316 161 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 ZNF569Q5MCW4 686 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 NECAB1Q8N987 351 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 AFG3L2Q9Y4W6 797 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 DIXDC1Q155Q3 683 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 CCDC89Q8N998 374 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 ZNF622Q969S3 477 aaKnown RBP eCLIP6.78□□□□□ -1.32
RFX3-212ENST00000617270 IFT74Q96LB3 600 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 CRNKL1Q9BZJ0 848 aaKnown RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 TRIM6Q9C030 488 aaPredicted RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
RFX3-212ENST00000617270 STX17P56962 302 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 RSPH3Q86UC2 560 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 TCEANC2Q96MN5 208 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 RABEP2Q9H5N1 569 aa6.78□□□□□ -1.32
RFX3-212ENST00000617270 RTL1A6NKG5 1358 aa6.77□□□□□ -1.32
RFX3-212ENST00000617270 STMN1P16949 149 aa6.77□□□□□ -1.32
RFX3-212ENST00000617270 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.32
RFX3-212ENST00000617270 ARHGEF2Q92974 986 aaKnown RBP6.77□□□□□ -1.32
RFX3-212ENST00000617270 RNF34Q969K3 372 aa6.77□□□□□ -1.32
RFX3-212ENST00000617270 JAKMIP2Q96AA8 810 aa6.77□□□□□ -1.32
RFX3-212ENST00000617270 ECHDC1Q9NTX5 307 aa6.77□□□□□ -1.32
RFX3-212ENST00000617270 TXNDC9O14530 226 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 HARSP12081 509 aaKnown RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 MAP7Q14244 749 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 DCAF17Q5H9S7 520 aaPredicted RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 WDR46O15213 610 aaKnown RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 LDHCP07864 332 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 TNNI2P48788 182 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 UVSSAQ2YD98 709 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 PRR16Q569H4 304 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 GSDMBQ8TAX9 411 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 FAM204AQ9H8W3 233 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 AGTPBP1Q9UPW5 1226 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 TSNAXIP1Q2TAA8 658 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 IFIT1BQ5T764 474 aaKnown RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 ANKRD24Q8TF21 1146 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 SSH1Q8WYL5 1049 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 ALG1Q9BT22 464 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 IQSEC3Q9UPP2 1182 aaPredicted RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 PRDM2Q13029 1718 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 KRT5P13647 590 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 GBP1P32455 592 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 TMPOP42166 694 aaKnown RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 ERCC6LQ2NKX8 1250 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 SH2D4BQ5SQS7 431 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 ARFGAP2Q8N6H7 521 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 CETN3O15182 167 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 TBC1D9Q6ZT07 1266 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 KRT9P35527 623 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 BIRC2Q13490 618 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 GPR161Q8N6U8 529 aaKnown RBP6.77□□□□□ -1.33
RFX3-212ENST00000617270 PLIN2Q99541 437 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 ARHGAP5Q13017 1502 aa6.77□□□□□ -1.33
RFX3-212ENST00000617270 VCXQ9H320 206 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 MTUS1Q9ULD2 1270 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
RFX3-212ENST00000617270 BIRC3Q13489 604 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 CCDC62Q6P9F0 684 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 UBE3BQ7Z3V4 1068 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 KCNG4Q8TDN1 519 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 FGD6Q6ZV73 1430 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 ZBTB43O43298 467 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 SMIM24O75264 130 aa6.76□□□□□ -1.33
RFX3-212ENST00000617270 RNASE9P60153 205 aaKnown RBP6.76□□□□□ -1.33
RFX3-212ENST00000617270 RTN1Q16799 776 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1160.7 ms