RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SCARF1Q14162 830 aa18.7■□□□□ 0.58
NR1H3-235ENST00000616973 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
NR1H3-235ENST00000616973 MTMR6Q9Y217 621 aa18.7■□□□□ 0.58
NR1H3-235ENST00000616973 DOCK2Q92608 1830 aa18.69■□□□□ 0.58
NR1H3-235ENST00000616973 A0A0G2JS52 829 aa18.69■□□□□ 0.58
NR1H3-235ENST00000616973 M0R2C6 588 aa18.69■□□□□ 0.58
NR1H3-235ENST00000616973 ZAP70P43403 619 aa18.69■□□□□ 0.58
NR1H3-235ENST00000616973 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
NR1H3-235ENST00000616973 PDCP20941 246 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 STOX1Q6ZVD7 989 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 APPBP2Q92624 585 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 TCEANC2Q96MN5 208 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 RGL2O15211 777 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 FGFR2P21802 821 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 MCAMP43121 646 aa18.68■□□□□ 0.58
NR1H3-235ENST00000616973 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-235ENST00000616973 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
NR1H3-235ENST00000616973 ATRNO75882 1429 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 KCNQ2O43526 872 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 ARID4AP29374 1257 aaPredicted RBP18.67■□□□□ 0.58
NR1H3-235ENST00000616973 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
NR1H3-235ENST00000616973 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 Q6ZUG5 572 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 LPIN2Q92539 896 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.67■□□□□ 0.58
NR1H3-235ENST00000616973 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
NR1H3-235ENST00000616973 NTSR2O95665 410 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 TMEM63CQ9P1W3 806 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 THSD7AQ9UPZ6 1657 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 A0A1B0GUL6 1792 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
NR1H3-235ENST00000616973 FAM98CQ17RN3 349 aaKnown RBP18.66■□□□□ 0.58
NR1H3-235ENST00000616973 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 NSFL1CQ9UNZ2 370 aaKnown RBP18.66■□□□□ 0.58
NR1H3-235ENST00000616973 BTAF1O14981 1849 aa18.66■□□□□ 0.58
NR1H3-235ENST00000616973 NHSQ6T4R5 1651 aa18.65■□□□□ 0.58
NR1H3-235ENST00000616973 E7EWF7 191 aa18.65■□□□□ 0.58
NR1H3-235ENST00000616973 HCLS1P14317 486 aaPredicted RBP18.65■□□□□ 0.58
NR1H3-235ENST00000616973 CCDC152Q4G0S7 254 aa18.65■□□□□ 0.58
NR1H3-235ENST00000616973 LARP1BQ659C4 914 aaKnown RBP18.65■□□□□ 0.58
NR1H3-235ENST00000616973 FNBP4Q8N3X1 1017 aaPredicted RBP18.65■□□□□ 0.58
NR1H3-235ENST00000616973 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
NR1H3-235ENST00000616973 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.58
NR1H3-235ENST00000616973 WASHC4Q2M389 1173 aa18.64■□□□□ 0.58
NR1H3-235ENST00000616973 CCDC102BQ68D86 513 aa18.64■□□□□ 0.58
NR1H3-235ENST00000616973 FBXL16Q8N461 479 aa18.64■□□□□ 0.58
NR1H3-235ENST00000616973 SYAP1Q96A49 352 aaPredicted RBP18.64■□□□□ 0.58
NR1H3-235ENST00000616973 NGLY1Q96IV0 654 aa18.64■□□□□ 0.58
NR1H3-235ENST00000616973 ADD2P35612 726 aa18.64■□□□□ 0.57
NR1H3-235ENST00000616973 PI16Q6UXB8 463 aa18.64■□□□□ 0.57
NR1H3-235ENST00000616973 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
NR1H3-235ENST00000616973 CNPY2Q9Y2B0 182 aa18.64■□□□□ 0.57
NR1H3-235ENST00000616973 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
NR1H3-235ENST00000616973 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
NR1H3-235ENST00000616973 FOXP2O15409 715 aa18.63■□□□□ 0.57
NR1H3-235ENST00000616973 SLC5A1P13866 664 aa18.63■□□□□ 0.57
NR1H3-235ENST00000616973 LLPHQ9BRT6 129 aaKnown RBP18.63■□□□□ 0.57
NR1H3-235ENST00000616973 PFKFB2O60825 505 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 UBE3CQ15386 1083 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 C8orf37Q96NL8 207 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
NR1H3-235ENST00000616973 PHKA1P46020 1223 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
NR1H3-235ENST00000616973 LRSAM1Q6UWE0 723 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 BRF1Q92994 677 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 GDPD2Q9HCC8 539 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 MYH15Q9Y2K3 1946 aa18.62■□□□□ 0.57
NR1H3-235ENST00000616973 VPS37CA5D8V6 355 aaPredicted RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 UBE2HP62256 183 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 STK3Q13188 491 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 FOXD4L6Q3SYB3 417 aaPredicted RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 FOXD4L3Q6VB84 417 aaPredicted RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 COL24A1Q17RW2 1714 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 GPAA1O43292 621 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 IGHMBP2P38935 993 aaKnown RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 FGD1P98174 961 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
NR1H3-235ENST00000616973 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
NR1H3-235ENST00000616973 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 FGAP02671 866 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 RC3H1Q5TC82 1133 aaKnown RBP18.6■□□□□ 0.57
NR1H3-235ENST00000616973 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 KLHL34Q8N239 644 aa18.6■□□□□ 0.57
NR1H3-235ENST00000616973 ZNF274Q96GC6 653 aaPredicted RBP18.6■□□□□ 0.57
NR1H3-235ENST00000616973 LY75O60449 1722 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms