RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.17
TNFRSF11A-205ENST00000616710 GUCY2CP25092 1073 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SYKP43405 635 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NOP2P46087 812 aaKnown RBP16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 KIAA1468Q9P260 1216 aa16.08■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 DPF2Q92785 391 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CAPN7Q9Y6W3 813 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CHL1O00533 1208 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PCDHA7Q9UN72 937 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 RXRAP19793 462 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CDC25BP30305 580 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CNPY4Q8N129 248 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CXorf56Q9H5V9 222 aa16.07■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NEBLO76041 1014 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ZNF202O95125 648 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 TXLNAP40222 546 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 EIF4A2Q14240 407 aaKnown RBP16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 GUCA1BQ9UMX6 200 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SPTLC2O15270 562 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 IPO7O95373 1038 aaKnown RBP16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 INPP5BP32019 993 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PNOCQ13519 176 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SCLT1Q96NL6 688 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 IMPACTQ9P2X3 320 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 COBLO75128 1261 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MUM1L1Q5H9M0 696 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 TOGARAM2Q6ZUX3 1019 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ABCC10Q5T3U5 1492 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CHGBP05060 677 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CCDC175P0C221 793 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 BCAS4Q8TDM0 211 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MTF1Q14872 753 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 GEMIN8Q9NWZ8 242 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 OTUD6BQ8N6M0 293 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
TNFRSF11A-205ENST00000616710 RNF40O75150 1001 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NF2P35240 595 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 GBP3Q9H0R5 595 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CTAGE9A4FU28 777 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MYL5Q02045 173 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 GSPT2Q8IYD1 628 aaKnown RBP16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MCTP2Q6DN12 878 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CLIC4Q9Y696 253 aa16.04■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ENC1O14682 589 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CASP8Q14790 479 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SARM1Q6SZW1 724 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 RPAINQ86UA6 219 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 RABGGTAQ92696 567 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PSMB7Q99436 277 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 FUT8Q9BYC5 575 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ATP1A2P50993 1020 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 IDI1Q13907 227 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 TRIM29Q14134 588 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 TADA2BQ86TJ2 420 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 HIP1O00291 1037 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SUFUQ9UMX1 484 aa16.03■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NDUFAB1O14561 156 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 ZRANB2O95218 330 aaKnown RBP eCLIP16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CCDC172P0C7W6 258 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SCRN1Q12765 414 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 MMS22LQ6ZRQ5 1243 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 SOWAHDA6NJG2 315 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 PEX19P40855 299 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
TNFRSF11A-205ENST00000616710 CCDC151A5D8V7 595 aa16.02■□□□□ 0.15
TNFRSF11A-205ENST00000616710 KRT32Q14532 448 aa16.02■□□□□ 0.15
TNFRSF11A-205ENST00000616710 NAA25Q14CX7 972 aa16.02■□□□□ 0.15
TNFRSF11A-205ENST00000616710 REXO1L1PQ8IX06 675 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms