RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 CREBZFQ9NS37 354 aa27.81■■■□□ 2.04
CBWD3-212ENST00000616550 HDAC5Q9UQL6 1122 aa27.81■■■□□ 2.04
CBWD3-212ENST00000616550 SNAP23O00161 211 aa27.8■■■□□ 2.04
CBWD3-212ENST00000616550 KLRK1P26718 216 aa27.8■■■□□ 2.04
CBWD3-212ENST00000616550 TRPM4Q8TD43 1214 aa27.8■■■□□ 2.04
CBWD3-212ENST00000616550 ZC3H15Q8WU90 426 aaKnown RBP27.8■■■□□ 2.04
CBWD3-212ENST00000616550 KLRG1Q96E93 195 aa27.8■■■□□ 2.04
CBWD3-212ENST00000616550 HIRAP54198 1017 aaPredicted RBP27.79■■■□□ 2.04
CBWD3-212ENST00000616550 SAMD7Q7Z3H4 446 aa27.79■■■□□ 2.04
CBWD3-212ENST00000616550 FBXW7Q969H0 707 aa27.79■■■□□ 2.04
CBWD3-212ENST00000616550 PUS3Q9BZE2 481 aaKnown RBP27.79■■■□□ 2.04
CBWD3-212ENST00000616550 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
CBWD3-212ENST00000616550 INTS3Q68E01 1043 aaKnown RBP27.78■■■□□ 2.04
CBWD3-212ENST00000616550 C15orf52Q6ZUT6 534 aaKnown RBP27.78■■■□□ 2.04
CBWD3-212ENST00000616550 PGAP2Q9UHJ9 254 aa27.78■■■□□ 2.04
CBWD3-212ENST00000616550 TMEM88BA6NKF7 163 aa27.77■■■□□ 2.04
CBWD3-212ENST00000616550 TBC1D10BQ4KMP7 808 aaPredicted RBP27.77■■■□□ 2.04
CBWD3-212ENST00000616550 RBM26Q5T8P6 1007 aaKnown RBP27.77■■■□□ 2.04
CBWD3-212ENST00000616550 STRIP1Q5VSL9 837 aa27.77■■■□□ 2.04
CBWD3-212ENST00000616550 ATF7IPQ6VMQ6 1270 aa27.77■■■□□ 2.04
CBWD3-212ENST00000616550 RIPOR2Q9Y4F9 1068 aa27.77■■■□□ 2.04
CBWD3-212ENST00000616550 MROH5Q6ZUA9 1318 aa27.76■■■□□ 2.03
CBWD3-212ENST00000616550 TRIM27P14373 513 aa27.76■■■□□ 2.03
CBWD3-212ENST00000616550 CD209Q9NNX6 404 aa27.76■■■□□ 2.03
CBWD3-212ENST00000616550 TTLL5Q6EMB2 1281 aa27.75■■■□□ 2.03
CBWD3-212ENST00000616550 ZNF804AQ7Z570 1209 aa27.75■■■□□ 2.03
CBWD3-212ENST00000616550 GMLQ99445 158 aa27.75■■■□□ 2.03
CBWD3-212ENST00000616550 ZNF609O15014 1411 aa27.75■■■□□ 2.03
CBWD3-212ENST00000616550 IRS2Q9Y4H2 1338 aa27.74■■■□□ 2.03
CBWD3-212ENST00000616550 USP17L8P0C7I0 530 aa27.74■■■□□ 2.03
CBWD3-212ENST00000616550 UBE4AQ14139 1066 aa27.74■■■□□ 2.03
CBWD3-212ENST00000616550 KIF4BQ2VIQ3 1234 aa27.74■■■□□ 2.03
CBWD3-212ENST00000616550 DACT2Q5SW24 774 aa27.74■■■□□ 2.03
CBWD3-212ENST00000616550 MYO3BQ8WXR4 1341 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 EGFRP00533 1210 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 LRRC24Q50LG9 513 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 METTL24Q5JXM2 366 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 ZKSCAN2Q63HK3 967 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 KLHDC4Q8TBB5 520 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 MEIS3Q99687 375 aa27.73■■■□□ 2.03
CBWD3-212ENST00000616550 LRRFIP2Q9Y608 721 aaKnown RBP27.73■■■□□ 2.03
CBWD3-212ENST00000616550 GNAI3P08754 354 aa27.72■■■□□ 2.03
CBWD3-212ENST00000616550 ZNF280AP59817 542 aaPredicted RBP27.72■■■□□ 2.03
CBWD3-212ENST00000616550 GTF2IP78347 998 aa27.72■■■□□ 2.03
CBWD3-212ENST00000616550 CDC37L1Q7L3B6 337 aa27.72■■■□□ 2.03
CBWD3-212ENST00000616550 CLUAP1Q96AJ1 413 aa27.72■■■□□ 2.03
CBWD3-212ENST00000616550 TRAF5O00463 557 aa27.71■■■□□ 2.03
CBWD3-212ENST00000616550 MXD3Q9BW11 206 aa27.71■■■□□ 2.03
CBWD3-212ENST00000616550 GLIS2Q9BZE0 524 aaPredicted RBP27.71■■■□□ 2.03
CBWD3-212ENST00000616550 TRPM7Q96QT4 1865 aa27.7■■■□□ 2.03
CBWD3-212ENST00000616550 POLR2AP24928 1970 aaKnown RBP27.7■■■□□ 2.03
CBWD3-212ENST00000616550 RFX5P48382 616 aaPredicted RBP27.7■■■□□ 2.02
CBWD3-212ENST00000616550 FMR1Q06787 632 aaKnown RBP eCLIP27.7■■■□□ 2.02
CBWD3-212ENST00000616550 OGFOD1Q8N543 542 aa27.7■■■□□ 2.02
CBWD3-212ENST00000616550 DCPSQ96C86 337 aaKnown RBP27.7■■■□□ 2.02
CBWD3-212ENST00000616550 TNNQ9UQP3 1299 aa27.7■■■□□ 2.02
CBWD3-212ENST00000616550 IL1R1P14778 569 aa27.69■■■□□ 2.02
CBWD3-212ENST00000616550 MYOZ2Q9NPC6 264 aa27.69■■■□□ 2.02
CBWD3-212ENST00000616550 MKRN1Q9UHC7 482 aaKnown RBP27.69■■■□□ 2.02
CBWD3-212ENST00000616550 PTPN12Q05209 780 aaKnown RBP27.68■■■□□ 2.02
CBWD3-212ENST00000616550 JMYQ8N9B5 988 aa27.68■■■□□ 2.02
CBWD3-212ENST00000616550 EYA2O00167 538 aa27.67■■■□□ 2.02
CBWD3-212ENST00000616550 PDE8BO95263 885 aa27.67■■■□□ 2.02
CBWD3-212ENST00000616550 HIBADHP31937 336 aaKnown RBP27.67■■■□□ 2.02
CBWD3-212ENST00000616550 MMP14P50281 582 aa27.67■■■□□ 2.02
CBWD3-212ENST00000616550 USP48Q86UV5 1035 aa27.67■■■□□ 2.02
CBWD3-212ENST00000616550 ABT1Q9ULW3 272 aaKnown RBP27.67■■■□□ 2.02
CBWD3-212ENST00000616550 ZNF646O15015 1829 aaPredicted RBP27.67■■■□□ 2.02
CBWD3-212ENST00000616550 SCARF1Q14162 830 aa27.66■■■□□ 2.02
CBWD3-212ENST00000616550 KRT26Q7Z3Y9 468 aa27.66■■■□□ 2.02
CBWD3-212ENST00000616550 GYG1P46976 350 aa27.65■■■□□ 2.02
CBWD3-212ENST00000616550 CST9Q5W186 159 aa27.65■■■□□ 2.02
CBWD3-212ENST00000616550 VPS37DQ86XT2 251 aa27.65■■■□□ 2.02
CBWD3-212ENST00000616550 VGLL2Q8N8G2 317 aa27.65■■■□□ 2.02
CBWD3-212ENST00000616550 HDAC9Q9UKV0 1011 aa27.65■■■□□ 2.02
CBWD3-212ENST00000616550 CNTNAP1P78357 1384 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 SASH1O94885 1247 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 CELF2O95319 508 aaKnown RBP27.64■■■□□ 2.02
CBWD3-212ENST00000616550 KIAA0825Q8IV33 1275 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 FTSJ3Q8IY81 847 aaKnown RBP27.64■■■□□ 2.02
CBWD3-212ENST00000616550 TMEM57Q8N5G2 664 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 FAM84BQ96KN1 310 aaPredicted RBP27.64■■■□□ 2.02
CBWD3-212ENST00000616550 GGA3Q9NZ52 723 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 FBXO3Q9UK99 471 aa27.64■■■□□ 2.02
CBWD3-212ENST00000616550 DEFB115Q30KQ5 88 aa27.63■■■□□ 2.01
CBWD3-212ENST00000616550 CAVIN4Q5BKX8 364 aa27.63■■■□□ 2.01
CBWD3-212ENST00000616550 SULF1Q8IWU6 871 aa27.63■■■□□ 2.01
CBWD3-212ENST00000616550 TDRD7Q8NHU6 1098 aaKnown RBP27.63■■■□□ 2.01
CBWD3-212ENST00000616550 SIL1Q9H173 461 aa27.63■■■□□ 2.01
CBWD3-212ENST00000616550 ZNF408Q9H9D4 720 aa27.63■■■□□ 2.01
CBWD3-212ENST00000616550 GNAI2P04899 355 aa27.62■■■□□ 2.01
CBWD3-212ENST00000616550 PUM3Q15397 648 aaKnown RBP27.62■■■□□ 2.01
CBWD3-212ENST00000616550 CIAO1O76071 339 aa27.61■■■□□ 2.01
CBWD3-212ENST00000616550 IFIT1P09914 478 aaKnown RBP27.61■■■□□ 2.01
CBWD3-212ENST00000616550 FKBP1AP62942 108 aaKnown RBP27.61■■■□□ 2.01
CBWD3-212ENST00000616550 ANGEL2Q5VTE6 544 aaKnown RBP27.61■■■□□ 2.01
CBWD3-212ENST00000616550 ATG9AQ7Z3C6 839 aa27.61■■■□□ 2.01
CBWD3-212ENST00000616550 FBXO33Q7Z6M2 555 aa27.61■■■□□ 2.01
CBWD3-212ENST00000616550 DZIP1LQ8IYY4 767 aaKnown RBP27.61■■■□□ 2.01
CBWD3-212ENST00000616550 ASTN2O75129 1339 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms